RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IGFL2Q6UWQ7 119 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 A0A0U1RQK1 487 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 A0A1W2PPV4 95 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 ZNF320A2RRD8 509 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 IFNL4K9M1U5 179 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 FCGR3BO75015 233 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 SSX2Q16385 188 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 CD177Q8N6Q3 437 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 Q8TCH9 128 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 MISP3Q96FF7 219 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 MSL2Q9HCI7 577 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 CLCF1Q9UBD9 225 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 F6UZH7 168 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 TIMM8AO60220 97 aaPredicted RBP15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 CEACAM4O75871 244 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 TAS2R60P59551 318 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 HTD2P86397 168 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 TREML4Q6UXN2 200 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 DMRTC2Q8IXT2 367 aaPredicted RBP15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 GBGT1Q8N5D6 347 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 PLPPR2Q96GM1 343 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 NDUFAF3Q9BU61 184 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 RRHO14718 337 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 SPINT2O43291 252 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 SNRPCP09234 159 aaKnown RBP15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 GPR12P47775 334 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 EDDM3AQ14507 147 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 SMIM21Q3B7S5 101 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 PRAMEF5Q5TYX0 476 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 Q6ZT83 130 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 C2orf88Q9BSF0 95 aa15.2■□□□□ 0.02
PCDHA1-202ENST00000394633 TRBV20OR9-2A0A075B6H5 130 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 RBFOX2O43251 390 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 IGKV3-15P01624 115 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 ADH4P08319 380 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 ARL14EPLP0DKL9 152 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 CCKARP32238 428 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 OPRK1P41145 380 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 SPCS3P61009 180 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 MRPL41Q8IXM3 137 aaKnown RBP15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 IMMP2LQ96T52 175 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 MGST2Q99735 147 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 TRAPPC1Q9Y5R8 145 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 PRSS46E5RG02 174 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 MPDU1O75352 247 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 HPRT1P00492 218 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 OR4A8P0C604 315 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 VDAC2P45880 294 aaPredicted RBP15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 FOXL1Q12952 345 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 FAM214BQ7L5A3 538 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 TMEM178AQ8NBL3 297 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 GGTLC1Q9BX51 225 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 PXMP4Q9Y6I8 212 aa15.19■□□□□ 0.02
PCDHA1-202ENST00000394633 KITLGP21583 273 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 FABP6P51161 128 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 MIC13Q5XKP0 118 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 SPACA3Q8IXA5 215 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 VKORC1L1Q8N0U8 176 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 OR4A16Q8NH70 328 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 SDSLQ96GA7 329 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 SFRP2Q96HF1 295 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 TRIB1Q96RU8 372 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 FAM234AQ9H0X4 552 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 MSRB2Q9Y3D2 182 aa15.18■□□□□ 0.02
PCDHA1-202ENST00000394633 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 FAM90A9PA6NNJ1 464 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 K7EM74 188 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 SOX15O60248 233 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 STAG3L2P0CL84 134 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 STAG3L3P0CL85 134 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 TRAT1Q6PIZ9 186 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 LRRC29Q8WV35 223 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 TMEM204Q9BSN7 226 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 HEYLQ9NQ87 328 aaPredicted RBP15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 TRAV3A0A0B4J244 114 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 RPP30P78346 268 aaKnown RBP15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 GUSBP1Q15486 140 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 MORN2Q502X0 79 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 LBHQ53QV2 105 aaPredicted RBP15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 CNEP1R1Q8N9A8 125 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 BEND2Q8NDZ0 799 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 SGMS2Q8NHU3 365 aa15.17■□□□□ 0.02
PCDHA1-202ENST00000394633 SCO2A0A1W2PP80 73 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 M0R1X1 148 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 CECR9P0C854 216 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 PRDX2P32119 198 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 PAX5Q02548 391 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 PDLIM3Q53GG5 364 aaPredicted RBP15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 FAM90A1Q86YD7 464 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 ABHD12Q8N2K0 398 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 TMEM256Q8N2U0 113 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 BTF3L4Q96K17 158 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 MDFIC2A0A1B0GVS7 189 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 NUPR1O60356 82 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 TMPRSS3P57727 454 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 RELBQ01201 579 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms