RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 OR52L2PQ8NGH6 319 aa15.79■□□□□ 0.12
HOXC6-202ENST00000394331 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
HOXC6-202ENST00000394331 CLEC7AQ9BXN2 247 aa15.79■□□□□ 0.12
HOXC6-202ENST00000394331 GAGE12BA1L429 117 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 NPIPB11E5RHQ5 1161 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 CX3CL1P78423 397 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 C6orf15Q6UXA7 325 aaPredicted RBP15.78■□□□□ 0.12
HOXC6-202ENST00000394331 PIGCQ92535 297 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 LIN7CQ9NUP9 197 aaKnown RBP15.78■□□□□ 0.12
HOXC6-202ENST00000394331 NAT8BQ9UHF3 227 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 SELENOVP59797 346 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 HTD2P86397 168 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 PSG7Q13046 419 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 ST6GALNAC3Q8NDV1 305 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 FGFBP3Q8TAT2 258 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 TMEM45BQ96B21 275 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 CLDN1O95832 211 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 IGLL1P15814 213 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 SLC23A3Q6PIS1 610 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 SPSB4Q96A44 273 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 CDX2Q99626 313 aaPredicted RBP15.78■□□□□ 0.12
HOXC6-202ENST00000394331 PRDM14Q9GZV8 571 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 MEGF9Q9H1U4 602 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 DEPPQ9NTK1 212 aa15.78■□□□□ 0.12
HOXC6-202ENST00000394331 HLA-DQA1P01909 254 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 PLA2G5P39877 138 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 TFF3Q07654 80 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 BATF2Q8N1L9 274 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 OR4S2Q8NH73 311 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 C11orf52Q96A22 123 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 ST20Q9HBF5 79 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 V9GYV3 84 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 DOCK11Q5JSL3 2073 aa15.77■□□□□ 0.12
HOXC6-202ENST00000394331 KIAA1549Q9HCM3 1950 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 K7EN84 100 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 LINC00869P0C866 280 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 TGFBR3Q03167 851 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 OR8B3Q8NGG8 313 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 OR1L1Q8NH94 360 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 ABHD3Q8WU67 409 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 CT55Q8WUE5 264 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 OR8B2Q96RD0 313 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 C1QTNF5Q9BXJ0 243 aa15.77■□□□□ 0.11
HOXC6-202ENST00000394331 BOKQ9UMX3 212 aaPredicted RBP15.77■□□□□ 0.11
HOXC6-202ENST00000394331 C9orf172C9J069 976 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 THBS3P49746 956 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 BVES-AS1Q5T3Y7 98 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 FAM58AQ8N1B3 248 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 ZNF439Q8NDP4 499 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 LOXL2Q9Y4K0 774 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 SLC17A3O00476 420 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 ACP1P24666 158 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 ZNF585BQ52M93 769 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 C12orf54Q6X4T0 127 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 ZNF611Q8N823 705 aa15.76■□□□□ 0.11
HOXC6-202ENST00000394331 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
HOXC6-202ENST00000394331 CD5LO43866 347 aa15.75■□□□□ 0.11
HOXC6-202ENST00000394331 MRPL33O75394 65 aaKnown RBP15.75■□□□□ 0.11
HOXC6-202ENST00000394331 FGF12P61328 243 aa15.75■□□□□ 0.11
HOXC6-202ENST00000394331 Q8N7P7 452 aa15.75■□□□□ 0.11
HOXC6-202ENST00000394331 C1RLQ9NZP8 487 aa15.75■□□□□ 0.11
HOXC6-202ENST00000394331 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.74■□□□□ 0.11
HOXC6-202ENST00000394331 BMPR1BO00238 502 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 IGLV2-14P01704 120 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 AMMECR1LQ6DCA0 310 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 LINC00470Q9BZP3 86 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 IGKV3D-15A0A087WSY6 115 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 TRGV10A0A0A0MS01 117 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 SCO2A0A1W2PP80 73 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 OR2T8A6NH00 312 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 MPV17L2Q567V2 206 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 COLCA1Q6ZS62 124 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 ATOH7Q8N100 152 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 PINLYPA6NC86 204 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 AMY1AP04745 511 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 SRIP30626 198 aa15.74■□□□□ 0.11
HOXC6-202ENST00000394331 FAM181BA6NEQ2 426 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 FRMD6-AS1P0C7T7 363 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 OR8I2Q8N0Y5 310 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 G3V4G9 280 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 M0R1X1 148 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 HLA-DRB1P01911 266 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 REG1BP48304 166 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 PAX2Q02962 417 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 IGFBP7Q16270 282 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 ZNF718Q3SXZ3 478 aa15.73■□□□□ 0.11
HOXC6-202ENST00000394331 EAF1Q96JC9 268 aaPredicted RBP15.73■□□□□ 0.11
HOXC6-202ENST00000394331 PEF1Q9UBV8 284 aaKnown RBP15.73■□□□□ 0.11
HOXC6-202ENST00000394331 ERRFI1Q9UJM3 462 aaPredicted RBP15.73■□□□□ 0.11
HOXC6-202ENST00000394331 ODAMA1E959 279 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 CXorf1O96002 111 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 IGLC1P0CG04 106 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 STAG3L2P0CL84 134 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 STAG3L3P0CL85 134 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 PSG9Q00887 426 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 FAM173AQ9BQD7 235 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 TRIOBPQ9H2D6 2365 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 A0A1W2PPV4 95 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 A0A1W2PR80 420 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 UBE2G1P62253 170 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms