RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ZZEF1O43149 2961 aa13.97□□□□□ -0.17
SIPA1-201ENST00000394224 M0R143 59 aa13.97□□□□□ -0.17
SIPA1-201ENST00000394224 LAMTOR5O43504 91 aa13.97□□□□□ -0.17
SIPA1-201ENST00000394224 P2RX4Q99571 388 aa13.97□□□□□ -0.17
SIPA1-201ENST00000394224 MRPL37Q9BZE1 423 aaKnown RBP13.97□□□□□ -0.17
SIPA1-201ENST00000394224 PXMP4Q9Y6I8 212 aa13.97□□□□□ -0.17
SIPA1-201ENST00000394224 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 LINC00479Q96M42 142 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 TECTBQ96PL2 329 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 TMEM30CPA0ZSE6 113 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 OR5B21A6NL26 309 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 MBP02144 154 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 CD46P15529 392 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 HOXC12P31275 282 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 TIMP3P35625 211 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 NUTF2P61970 127 aaKnown RBP13.96□□□□□ -0.17
SIPA1-201ENST00000394224 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 PMS2CLQ68D20 193 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 TMEM14EPQ6UXP3 125 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 KLF14Q8TD94 323 aaPredicted RBP13.96□□□□□ -0.17
SIPA1-201ENST00000394224 UHRF2Q96PU4 802 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 HCFC1P51610 2035 aa13.96□□□□□ -0.17
SIPA1-201ENST00000394224 CD24P25063 80 aa13.96□□□□□ -0.18
SIPA1-201ENST00000394224 CRYBB3P26998 211 aa13.96□□□□□ -0.18
SIPA1-201ENST00000394224 LSM10Q969L4 123 aaKnown RBP13.96□□□□□ -0.18
SIPA1-201ENST00000394224 YTHDF2Q9Y5A9 579 aaKnown RBP13.96□□□□□ -0.18
SIPA1-201ENST00000394224 MPC1Q9Y5U8 109 aa13.96□□□□□ -0.18
SIPA1-201ENST00000394224 IGHV3-21A0A0B4J1V1 117 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 AHRRA9YTQ3 701 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 REG1BP48304 166 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 CCL11P51671 97 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 KRTCAP3Q53RY4 240 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 ZNF645Q8N7E2 425 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 OR10G8Q8NGN5 311 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 MRPL18Q9H0U6 180 aaKnown RBP13.95□□□□□ -0.18
SIPA1-201ENST00000394224 TP53TG5Q9Y2B4 290 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 SPRY3O43610 288 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 AMTP48728 403 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 TNFSF10P50591 281 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 PSG5Q15238 335 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 GBGT1Q8N5D6 347 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 ARRDC1-AS1Q9H2J1 176 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 POLDIP2Q9Y2S7 368 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 C17orf112F2Z3M2 114 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 SPCS3P61009 180 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 DUX4L9Q6RFH8 374 aaPredicted RBP13.95□□□□□ -0.18
SIPA1-201ENST00000394224 Q6ZSR3 168 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 LRRC29Q8WV35 223 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 COQ2Q96H96 371 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 APC2O95996 2303 aa13.95□□□□□ -0.18
SIPA1-201ENST00000394224 FOXF2Q12947 444 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 DCAF10Q5QP82 559 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 PQLC2Q6ZP29 291 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 COL4A2P08572 1712 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 ACTL10Q5JWF8 245 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 LCN12Q6JVE5 192 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 Q6ZWC4 215 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 OR5R1Q8NH85 324 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 ST6GALNAC6Q969X2 333 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 SNRNP40Q96DI7 357 aaKnown RBP13.94□□□□□ -0.18
SIPA1-201ENST00000394224 DIRC2Q96SL1 478 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 RNF114Q9Y508 228 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 KIAA1549Q9HCM3 1950 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 TCF21O43680 179 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 CAMPP49913 170 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 MMDQ15546 238 aa13.94□□□□□ -0.18
SIPA1-201ENST00000394224 RNF212BA8MTL3 300 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 SPRNQ5BIV9 151 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 FBXW9Q5XUX1 488 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 ZCCHC24Q8N2G6 241 aaKnown RBP13.93□□□□□ -0.18
SIPA1-201ENST00000394224 MCRIP2Q9BUT9 160 aaKnown RBP13.93□□□□□ -0.18
SIPA1-201ENST00000394224 VAMP8Q9BV40 100 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
SIPA1-201ENST00000394224 C15orf62A8K5M9 175 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 MLNRO43193 412 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 GPR6P46095 362 aaPredicted RBP13.93□□□□□ -0.18
SIPA1-201ENST00000394224 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
SIPA1-201ENST00000394224 LYG1Q8N1E2 194 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 ACY3Q96HD9 319 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 TXN2Q99757 166 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
SIPA1-201ENST00000394224 SMPD2O60906 423 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 MRPL49Q13405 166 aaKnown RBP13.92□□□□□ -0.18
SIPA1-201ENST00000394224 SSPNQ14714 243 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 HIPK2Q9H2X6 1198 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 TMEM242Q9NWH2 141 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 TMEM250H0YL14 139 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 IGFBP2P18065 325 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 MIR17HGQ75NE6 70 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A10PA6NDY2 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A18PA6NE21 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A16PA6NEW6 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A20PA6NIJ5 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A8PA6NJQ4 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A7PA6NKC0 464 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms