RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 CFHR2P36980 270 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 S100A10P60903 97 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 UTF1Q5T230 341 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 GGNBP1Q5YKI7 109 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 CCDC71LQ8N9Z2 235 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 GALMQ96C23 342 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 OR2S2Q9NQN1 319 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 CCDC168Q8NDH2 2452 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 C3orf85A0A1B0GTC6 90 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 LRRC30A6NM36 301 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 C19orf84I3L1E1 186 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 K7N7A8 449 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 M0QZ24 198 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 HLA-GP17693 338 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 GPR12P47775 334 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 KCNJ3P48549 501 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 TMEM187Q14656 261 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 IAH1Q2TAA2 248 aaPredicted RBP4.83□□□□□ -1.64
CASC3-202ENST00000394114 STUMQ69YW2 141 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 LPCAT3Q6P1A2 487 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 ZNF546Q86UE3 836 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 CMTM1Q8IZ96 169 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 LEAP2Q969E1 77 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 C14orf144Q96I85 54 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 GAFA1Q96PS6 74 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 ARL6Q9H0F7 186 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 RAB18Q9NP72 206 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 GOLT1BQ9Y3E0 138 aa4.83□□□□□ -1.64
CASC3-202ENST00000394114 A0A087X0K7 114 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 A0A1W2PPE3 182 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 MGST3O14880 152 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SAP30O75446 220 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CLDN14O95500 239 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 MPC2O95563 127 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CD8AP01732 235 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 LINC00205P59089 165 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 ZNF672Q499Z4 452 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 BTNL3Q6UXE8 466 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SLC35G3Q8N808 338 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 ITLN2Q8WWU7 325 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 OR2D2Q9H210 308 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SLA2Q9H6Q3 261 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 TMEM106BQ9NUM4 274 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 A0A1B0GW15 77 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 H0YIZ8 118 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 TMEM178BH3BS89 294 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PGLYRP1O75594 196 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 EIF3GO75821 320 aaKnown RBP eCLIP4.82□□□□□ -1.64
CASC3-202ENST00000394114 RGS11O94810 467 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 IGLV2-14P01704 120 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PSMB6P28072 239 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 LOXP28300 417 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 CD1BP29016 333 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 ATP5J2P56134 94 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 OPCMLQ14982 345 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 IZUMO4Q1ZYL8 232 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 C11orf87Q6NUJ2 197 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 LYPD2Q6UXB3 125 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 THAP6Q8TBB0 222 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 Q8TCH9 128 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 FAM222BQ8WU58 562 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 DCUN1D4Q92564 292 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 RBMXL1Q96E39 390 aaKnown RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 GALNT14Q96FL9 552 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SUCNR1Q9BXA5 334 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 TMEM222Q9H0R3 208 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 GAL3ST2Q9H3Q3 398 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 ZNF665Q9H7R5 613 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 OR5AC2Q9NZP5 309 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 GNG12Q9UBI6 72 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PSG11Q9UQ72 335 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 UBR5O95071 2799 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 PPIAL4EA0A075B759 164 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 A0A0B4J2A0 478 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 A0A1W2PPR1 153 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CYSRT1A8MQ03 144 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SPINT2O43291 252 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 BRI3O95415 125 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CFDP00746 253 aaPredicted RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 IFNA21P01568 189 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CD55P08174 381 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 PPIAL4FP0DN26 164 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 COL8A2P25067 703 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 NFYBP25208 207 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 CEACAM3P40198 252 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 SNRPEP62304 92 aaKnown RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 TMUB2Q71RG4 321 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 ZNF695Q8IW36 515 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 LGI3Q8N145 548 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 DRAM1Q8N682 238 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 H1FXQ92522 213 aaKnown RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 ERGIC1Q969X5 290 aa4.82□□□□□ -1.64
CASC3-202ENST00000394114 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
CASC3-202ENST00000394114 C2orf50Q96LR7 162 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms