RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 OR1L8Q8NGR8 309 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 OR9G1Q8NH87 305 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 GNB4Q9HAV0 340 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 SPEGQ15772 3267 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 CGAP01215 116 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 RBP4P02753 201 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 SPCS3P61009 180 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 TCTEX1D1Q8N7M0 179 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 SMIM8Q96KF7 97 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 E7EQL1 145 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 SSX2Q16385 188 aa10.66□□□□□ -0.7
ERCC2-204ENST00000391945 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
ERCC2-204ENST00000391945 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
ERCC2-204ENST00000391945 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 SAA2-SAA4A0A096LPE2 208 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 FGF16O43320 207 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 COX7A2P2O60397 106 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 SAA2P0DJI9 122 aaPredicted RBP10.65□□□□□ -0.7
ERCC2-204ENST00000391945 CD1BP29016 333 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 PCSK4Q6UW60 755 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 C15orf54Q8N8G6 183 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 NEIL1Q96FI4 390 aaPredicted RBP10.65□□□□□ -0.7
ERCC2-204ENST00000391945 SLX1AQ9BQ83 275 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 RPRMQ9NS64 109 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 MGST1P10620 155 aaKnown RBP10.65□□□□□ -0.7
ERCC2-204ENST00000391945 RAB5AP20339 215 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 GRNP28799 593 aaKnown RBP10.65□□□□□ -0.7
ERCC2-204ENST00000391945 FAM169BQ8N8A8 192 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 ST6GALNAC3Q8NDV1 305 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
ERCC2-204ENST00000391945 CHRNA7P36544 502 aa10.65□□□□□ -0.71
ERCC2-204ENST00000391945 HTD2P86397 168 aa10.65□□□□□ -0.71
ERCC2-204ENST00000391945 ACSM6Q6P461 480 aa10.65□□□□□ -0.71
ERCC2-204ENST00000391945 TOX4O94842 621 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 ACAA1P09110 424 aaPredicted RBP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 MMP9P14780 707 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 ORM2P19652 201 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 LINC00469Q8N7U9 141 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 TMEM204Q9BSN7 226 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 LINC00312Q9Y6C7 94 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 REG1AP05451 166 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CT45A6P0DMU7 189 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CT45A5P0DMU8 189 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CT45A7P0DMV0 189 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 RPL8P62917 257 aaKnown RBP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 KRTAP27-1Q3LI81 207 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CT45A1Q5HYN5 189 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CT45A3Q8NHU0 189 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 A0A1W2PN81 502 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 CLDN34H7C241 214 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 YPEL1O60688 119 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 PAGE4O60829 102 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 B2MP61769 119 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 TAF15Q92804 592 aaKnown RBP eCLIP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 YPEL2Q96QA6 119 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
ERCC2-204ENST00000391945 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 MIOXQ9UGB7 285 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 WASHC3Q9Y3C0 194 aa10.64□□□□□ -0.71
ERCC2-204ENST00000391945 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 TAS2R45P59539 299 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 TMEM241Q24JQ0 296 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 ZNF672Q499Z4 452 aaPredicted RBP10.63□□□□□ -0.71
ERCC2-204ENST00000391945 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 GINS3Q9BRX5 216 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 ANAPC10Q9UM13 185 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 LIPFP07098 398 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 ATP5J2P56134 94 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 SRSF4Q08170 494 aaKnown RBP10.63□□□□□ -0.71
ERCC2-204ENST00000391945 TMEM37Q8WXS4 190 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 IGHV3OR16-10A0A075B7F0 116 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 FOXI3A8MTJ6 420 aaPredicted RBP10.63□□□□□ -0.71
ERCC2-204ENST00000391945 TMEM178BH3BS89 294 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 SLC31A2O15432 143 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 LY86O95711 162 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 CD55P08174 381 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 DUTP33316 252 aaKnown RBP10.63□□□□□ -0.71
ERCC2-204ENST00000391945 LCN2P80188 198 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 SPRNQ5BIV9 151 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 ZNF880Q6PDB4 577 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 LYPD2Q6UXB3 125 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 ZNRD1Q9P1U0 126 aa10.63□□□□□ -0.71
ERCC2-204ENST00000391945 A0A0G2JRQ6 117 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 FAM90A26D6RGX4 464 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 KBTBD11O94819 623 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 CCL20P78556 96 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 ID3Q02535 119 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 Q8NA96 180 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 NUP37Q8NFH4 326 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 FAM210BQ96KR6 192 aa10.62□□□□□ -0.71
ERCC2-204ENST00000391945 CLEC7AQ9BXN2 247 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms