RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 TREML4Q6UXN2 200 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ZBTB34Q8NCN2 500 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ZNRF1Q8ND25 227 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 MDS2Q8NDY4 140 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 ACY3Q96HD9 319 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 TAAR6Q96RI8 345 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 IER2Q9BTL4 223 aa17.42■□□□□ 0.38
COL23A1-201ENST00000390654 G0S2P27469 103 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 FAM201AQ5SY85 155 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 CISD2Q8N5K1 135 aaKnown RBP17.41■□□□□ 0.38
COL23A1-201ENST00000390654 WDR83OSQ9Y284 106 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 F6UZH7 168 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 OR2Z1Q8NG97 314 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 PXMP4Q9Y6I8 212 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 ATMQ13315 3056 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 C21orf140B9A014 251 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 FOXH1O75593 365 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 OCC1Q8TAD7 63 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 LURAP1Q96LR2 239 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 FKBP11Q9NYL4 201 aa17.41■□□□□ 0.38
COL23A1-201ENST00000390654 MDFIC2A0A1B0GVS7 189 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SPINT2O43291 252 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SP9P0CG40 484 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 HOXC12P31275 282 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 ADMP35318 185 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SRP14P37108 136 aaKnown RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 ZNF134P52741 427 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 GABRA6Q16445 453 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 VHLLQ6RSH7 139 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SFRP2Q96HF1 295 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 FER1L6-AS2Q96M78 137 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 MGST2Q99735 147 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 NDUFAF3Q9BU61 184 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 HES4Q9HCC6 221 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SEPSECSQ9HD40 501 aaKnown RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 ZFHX2Q9C0A1 2572 aaPredicted RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 TET2Q6N021 2002 aaPredicted RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 KITLGP21583 273 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 DUTP33316 252 aaKnown RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 HLA-DRB5Q30154 266 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 COA6Q5JTJ3 125 aaKnown RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 ASPHD1Q5U4P2 390 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 GBGT1Q8N5D6 347 aa17.4■□□□□ 0.38
COL23A1-201ENST00000390654 MRPL37Q9BZE1 423 aaKnown RBP17.4■□□□□ 0.38
COL23A1-201ENST00000390654 SPRNQ5BIV9 151 aa17.39■□□□□ 0.38
COL23A1-201ENST00000390654 MKRN2OSH3BPM6 223 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 GCGP01275 180 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 C1orf229Q6ZS94 237 aaPredicted RBP17.39■□□□□ 0.37
COL23A1-201ENST00000390654 ZDHHC11Q9H8X9 412 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 YTHDF2Q9Y5A9 579 aaKnown RBP17.39■□□□□ 0.37
COL23A1-201ENST00000390654 VENTXO95231 258 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 SLC35B1P78383 322 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 MS4A10Q96PG2 267 aa17.39■□□□□ 0.37
COL23A1-201ENST00000390654 HSD17B10Q99714 261 aaKnown RBP17.39■□□□□ 0.37
COL23A1-201ENST00000390654 PRDX2P32119 198 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 RPL15P61313 204 aaKnown RBP17.38■□□□□ 0.37
COL23A1-201ENST00000390654 OR5I1Q13606 314 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 TDRG1Q3Y452 100 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 CYB5R2Q6BCY4 276 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 CXXC4Q9H2H0 198 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 CECR9P0C854 216 aa17.38■□□□□ 0.37
COL23A1-201ENST00000390654 GMPPAQ96IJ6 420 aaPredicted RBP17.38■□□□□ 0.37
COL23A1-201ENST00000390654 PDE6DO43924 150 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 PDLIM4P50479 330 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 ZNF90Q03938 601 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 VWC2Q2TAL6 325 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 TMEM210A6NLX4 147 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 RPL29P47914 159 aaKnown RBP17.37■□□□□ 0.37
COL23A1-201ENST00000390654 SSTP61278 116 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 FDCSPQ8NFU4 85 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 GGTLC1Q9BX51 225 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 ELOVL5Q9NYP7 299 aa17.37■□□□□ 0.37
COL23A1-201ENST00000390654 F2Z2F3 143 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 IQCJQ1A5X6 159 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 SMIM21Q3B7S5 101 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 DNLZQ5SXM8 178 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 MOB3BQ86TA1 216 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 TCAPO15273 167 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 RPL31P62899 125 aaKnown RBP17.36■□□□□ 0.37
COL23A1-201ENST00000390654 FAM214BQ7L5A3 538 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 NOL4LQ96MY1 436 aaPredicted RBP17.36■□□□□ 0.37
COL23A1-201ENST00000390654 C15orf65H3BRN8 121 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 GATA2P23769 480 aaPredicted RBP17.36■□□□□ 0.37
COL23A1-201ENST00000390654 DBX2Q6ZNG2 339 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 SNHG12Q9BXW3 62 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 TMEM140Q9NV12 185 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 POLR3KQ9Y2Y1 108 aaPredicted RBP17.36■□□□□ 0.37
COL23A1-201ENST00000390654 YLPM1P49750 1951 aaKnown RBP17.36■□□□□ 0.37
COL23A1-201ENST00000390654 ACACAQ13085 2346 aa17.36■□□□□ 0.37
COL23A1-201ENST00000390654 OTOGLQ3ZCN5 2332 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 TYMSP04818 313 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 TBX15Q96SF7 602 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 KCNIP2Q9NS61 270 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 TIMP3P35625 211 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 ERVK-16P61578 105 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 OR4P4Q8NGL7 312 aa17.35■□□□□ 0.37
COL23A1-201ENST00000390654 GFRA3O60609 400 aa17.34■□□□□ 0.37
COL23A1-201ENST00000390654 MORN2Q502X0 79 aa17.34■□□□□ 0.37
COL23A1-201ENST00000390654 DUX4L9Q6RFH8 374 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms