RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TNCP24821 2201 aa0.13□□□□□ -2.39
RNU6-541P-201ENST00000384709 E9PCH4 1651 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 TRAV38-1A0A0B4J264 116 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 DAPL1A0PJW8 107 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 TMEM213A2RRL7 107 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 TRAPPC2LH3BP13 241 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 GEMIN2O14893 280 aaKnown RBP0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 CREBL2O60519 120 aaPredicted RBP0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 APOMO95445 188 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 S100A9P06702 114 aaKnown RBP0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 MSMBP08118 114 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 PVALBP20472 110 aaPredicted RBP0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 EMX1Q04741 257 aaPredicted RBP0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 GNA13Q14344 377 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 FAM27BQ5VT28 67 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 DHFR2Q86XF0 187 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 UMODL1-AS1Q8N2C9 162 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 TMEM86AQ8N2M4 240 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNF439Q8NDP4 499 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 RBP7Q96R05 134 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 CCL13Q99616 98 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 REG4Q9BYZ8 158 aa0.12□□□□□ -2.39
RNU6-541P-201ENST00000384709 NAV3Q8IVL0 2385 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 PTPRFP10586 1907 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 LOC110117498A0A087WWA1 95 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 TMED7-TICAM2A0A0A6YYA0 188 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNF879B4DU55 563 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 H3BT86 120 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 AZIN1O14977 448 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 TOX3O15405 576 aaPredicted RBP0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 DEFA4P12838 97 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 CXCL2P19875 107 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 KDELR2P33947 212 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 HLA-DRB3P79483 266 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 HLA-DRB5Q30154 266 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 FAM19A5Q7Z5A7 132 aaPredicted RBP0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 C12orf29Q8N999 325 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNF565Q8N9K5 539 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 OR8B3Q8NGG8 313 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 TMA16Q96EY4 203 aaKnown RBP0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 MRPL57Q9BQC6 102 aaKnown RBP0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 SIKE1Q9BRV8 207 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 MROQ9BYG7 248 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 SLC22A4Q9H015 551 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNHIT6Q9NWK9 470 aaKnown RBP0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 EURLQ9NYK6 297 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 HDGFL3Q9Y3E1 203 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 SPTBP11277 2137 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZDBF2Q9HCK1 2354 aa0.11□□□□□ -2.39
RNU6-541P-201ENST00000384709 SIP14410 1827 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 FREM3P0C091 2139 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 KIF24Q5T7B8 1368 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 TRBV10-2A0A0K0K1G8 114 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 FTCDNL1E5RQL4 147 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 CCRL2O00421 344 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ORC5O43913 435 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ORM1P02763 201 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 KRT7P08729 469 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 TRGC1P0CF51 173 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 HIST1H1CP16403 213 aaKnown RBP0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 F8A1P23610 371 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 RUNX1Q01196 453 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 MGAT3Q09327 533 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 SMAGPQ0VAQ4 97 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNHIT3Q15649 155 aaPredicted RBP0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 C9orf64Q5T6V5 341 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 AADACL4Q5VUY2 407 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 RASSF6Q6ZTQ3 369 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 OR7G1Q8NGA0 311 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 SLC37A2Q8TED4 501 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ASB13Q8WXK3 278 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZNF75CPQ92670 426 aaPredicted RBP0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 GNPNAT1Q96EK6 184 aaPredicted RBP0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 HES4Q9HCC6 221 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 AGPAT3Q9NRZ7 376 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ASH1LQ9NR48 2969 aaKnown RBP0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 ZGRF1Q86YA3 2104 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 TET1Q8NFU7 2136 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 OBSL1O75147 1896 aa0.1□□□□□ -2.39
RNU6-541P-201ENST00000384709 TAF1LQ8IZX4 1826 aa0.09□□□□□ -2.39
RNU6-541P-201ENST00000384709 C5orf49A4QMS7 147 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 COX7A2LO14548 114 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 CLPSP04118 112 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 IL6P05231 212 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 TFPTP0C1Z6 253 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 CXCL3P19876 107 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 SYT1P21579 422 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 CD40LGP29965 261 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 DDTP30046 118 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 CDK9P50750 372 aaKnown RBP0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 TEX36Q5VZQ5 186 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 DNM1P34Q6PK57 102 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 RIBC1Q8N443 379 aaPredicted RBP0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 PACRGLQ8N7B6 248 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 SGMS2Q8NHU3 365 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 RAB2BQ8WUD1 216 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 LINC00526Q96FQ7 95 aa0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 PACRGQ96M98 296 aaPredicted RBP0.09□□□□□ -2.4
RNU6-541P-201ENST00000384709 NSRP1Q9H0G5 558 aaKnown RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms