RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 LCE6AA0A183 80 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 NPIPB5A8MRT5 1133 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 DHFRP00374 187 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 IGLV2-14P01704 120 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 ZNF66Q6ZN08 573 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 TMEM167AQ8TBQ9 72 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 FYTTD1Q96QD9 318 aaKnown RBP13.07□□□□□ -0.32
HMGN1-204ENST00000380749 Q9H521 79 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 PLEKHA3Q9HB20 300 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 TAS2R8Q9NYW2 309 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
HMGN1-204ENST00000380749 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
HMGN1-204ENST00000380749 SSX5O60225 188 aa13.06□□□□□ -0.32
HMGN1-204ENST00000380749 GGCTO75223 188 aaKnown RBP13.06□□□□□ -0.32
HMGN1-204ENST00000380749 HRASP01112 189 aa13.06□□□□□ -0.32
HMGN1-204ENST00000380749 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-204ENST00000380749 PUSL1Q8N0Z8 303 aaKnown RBP13.06□□□□□ -0.32
HMGN1-204ENST00000380749 NEURL2Q9BR09 285 aa13.06□□□□□ -0.32
HMGN1-204ENST00000380749 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 PPP5D1E7EU14 171 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 MECP2P51608 486 aaKnown RBP13.05□□□□□ -0.32
HMGN1-204ENST00000380749 SCAND1P57086 179 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 ETV7Q9Y603 341 aa13.05□□□□□ -0.32
HMGN1-204ENST00000380749 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
HMGN1-204ENST00000380749 C2orf70A6NJV1 201 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 ZNF735P0CB33 412 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 RPL8P62917 257 aaKnown RBP13.04□□□□□ -0.32
HMGN1-204ENST00000380749 EIF4EBP1Q13541 118 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-204ENST00000380749 MSMO1Q15800 293 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 BEST4Q8NFU0 473 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 OR13F1Q8NGS4 319 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 SECTM1Q8WVN6 248 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
HMGN1-204ENST00000380749 TECRQ9NZ01 308 aaKnown RBP13.04□□□□□ -0.32
HMGN1-204ENST00000380749 IL6RP08887 468 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-204ENST00000380749 FOLR2P14207 255 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
HMGN1-204ENST00000380749 SDC2P34741 201 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 ARL3P36405 182 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 MXD1Q05195 221 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 ADAMTSL5Q6ZMM2 481 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 EEF1AKMT3Q96AZ1 226 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 BET1LQ9NYM9 111 aa13.03□□□□□ -0.32
HMGN1-204ENST00000380749 TRAV18A0A075B6X5 111 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 A0A0A6YYH2 397 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 A6NJ64 397 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 LGALS9O00182 355 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 TNFSF12O43508 249 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
HMGN1-204ENST00000380749 CRYGCP07315 174 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 AREGP15514 252 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 HLA-GP17693 338 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 PSMB6P28072 239 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 FCGR2CP31995 323 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 CATR1Q13166 79 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 ZBTB34Q8NCN2 500 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 YTHDF1Q9BYJ9 559 aaKnown RBP13.02□□□□□ -0.33
HMGN1-204ENST00000380749 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
HMGN1-204ENST00000380749 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 E7EUB6 86 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 OR2C1O95371 312 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 PPYP01298 95 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 IGHV3-23P01764 117 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CD7P09564 240 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 DEFA4P12838 97 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CTRB1P17538 263 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 IDNKQ5T6J7 187 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CTRB2Q6GPI1 263 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 OR4A47Q6IF82 309 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 ZNF773Q6PK81 442 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CLEC19AQ6UXS0 136 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 HOGA1Q86XE5 327 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 GPHB5Q86YW7 130 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 SPAG16Q8N0X2 631 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 IL17DQ8TAD2 202 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 SLC25A38Q96DW6 304 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 GPHA2Q96T91 129 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 RETNQ9HD89 108 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 HRASLSQ9HDD0 168 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 CCL28Q9NRJ3 127 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 GAR1Q9NY12 217 aaKnown RBP13.01□□□□□ -0.33
HMGN1-204ENST00000380749 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
HMGN1-204ENST00000380749 A0A1B0GW64 132 aa13□□□□□ -0.33
HMGN1-204ENST00000380749 ZNF785A8K8V0 405 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms