RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ZBTB34Q8NCN2 500 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 MBD6Q96DN6 1003 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 CITED2Q99967 270 aaPredicted RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 PCNX3Q9H6A9 2034 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 FREM3P0C091 2139 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ADAM20O43506 726 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 BGLAPP02818 100 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 PTGDSP41222 190 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 GRB2P62993 217 aaKnown RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ZIC1Q15915 447 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 LRRC75BQ2VPJ9 315 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 RNF144BQ7Z419 303 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 TTC9CQ8N5M4 171 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 OR51T1Q8NGJ9 327 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 PTH2Q96A98 100 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ZNF816-ZNF321PA0A0X1KG74 233 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 F5H5K5 113 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 VDAC2P45880 294 aaPredicted RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 HERV-K104P61576 105 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 GNB1P62873 340 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 FOXE3Q13461 319 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ZNF695Q8IW36 515 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 ARPC1AQ92747 370 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 GGTLC1Q9BX51 225 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM191AQ9H0A3 160 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 OR2D2Q9H210 308 aa7.89□□□□□ -1.15
PTPRA-204ENST00000380393 DNAJB12Q9NXW2 375 aaKnown RBP7.89□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE12JA6NER3 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 FAM90A27PA6NNH2 459 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 BMPR1BO00238 502 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE7O76087 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 ISG15P05161 165 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE12FP0CL80 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE12GP0CL81 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE12IP0CL82 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 BLVRBP30043 206 aaPredicted RBP7.88□□□□□ -1.15
PTPRA-204ENST00000380393 INSL3P51460 131 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 PAX9P55771 341 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GAGE4Q13068 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 MYBPHQ13203 477 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 PDCD1Q15116 288 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 RPEL1Q2QD12 228 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
PTPRA-204ENST00000380393 C2orf91Q6ZV80 131 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 SYT8Q8NBV8 401 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM52Q8NDY8 209 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 MCTS1Q9ULC4 181 aaKnown RBP7.88□□□□□ -1.15
PTPRA-204ENST00000380393 KCNS2Q9ULS6 477 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 CSDC2Q9Y534 153 aaKnown RBP7.88□□□□□ -1.15
PTPRA-204ENST00000380393 SYNGR1O43759 233 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 SLC35B1P78383 322 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 CEACAM16Q2WEN9 425 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 TIGITQ495A1 244 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 MMD2Q8IY49 270 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 OR51E1Q8TCB6 317 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 GLMPQ8WWB7 406 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 RAB40CQ96S21 281 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 OR10A2Q9H208 303 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 NCOA6Q14686 2063 aaPredicted RBP7.88□□□□□ -1.15
PTPRA-204ENST00000380393 A0A087WX48 190 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 K7EQS6 105 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 IGKV1D-33P01593 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 IGKV1-33P01594 117 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 PVRP15151 417 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 ZNF766Q5HY98 468 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 VN1R4Q7Z5H5 301 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 ELSPBP1Q96BH3 223 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 VGLL1Q99990 258 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 LIME1Q9H400 295 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 OR1A1Q9P1Q5 309 aa7.88□□□□□ -1.15
PTPRA-204ENST00000380393 PCDH15Q96QU1 1955 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 LOC102723996A0A087X1L8 192 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 KLF7O75840 302 aaPredicted RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 OR3A4PP47883 348 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 RPS4XP62701 263 aaKnown RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 RPL18Q07020 188 aaKnown RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 CARD17Q5XLA6 110 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 CTXND1A0A1B0GTU2 59 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 CEACAM4O75871 244 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 IGKV1D-16P01601 117 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 FCGR2BP31994 310 aaPredicted RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 DGAT2L6Q6ZPD8 337 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 NANOS1Q8WY41 292 aaKnown RBP7.87□□□□□ -1.15
PTPRA-204ENST00000380393 GCM1Q9NP62 436 aa7.87□□□□□ -1.15
PTPRA-204ENST00000380393 TRGV10A0A0A0MS01 117 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 LOC101059948A0A1B0GTJ6 334 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 FABP5P3A8MUU1 101 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 TIMM23BQ5SRD1 257 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM136Q6ZRR5 245 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 Q6ZS52 159 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 Q6ZUT4 128 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 CCDC179H3BU77 68 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 SNRNP200O75643 2136 aaKnown RBP7.86□□□□□ -1.15
PTPRA-204ENST00000380393 C1orf162Q8NEQ5 155 aaPredicted RBP7.86□□□□□ -1.15
PTPRA-204ENST00000380393 HDHD3Q9BSH5 251 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms