RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 DUSP15Q9H1R2 295 aaPredicted RBP10.62□□□□□ -0.71
CHD3-203ENST00000380358 F5P12259 2224 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 INTS1Q8N201 2190 aaKnown RBP10.62□□□□□ -0.71
CHD3-203ENST00000380358 H3BRM9 83 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 PRB1P04280 392 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 PLPPR5Q32ZL2 321 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 SCARF2Q96GP6 870 aaPredicted RBP10.62□□□□□ -0.71
CHD3-203ENST00000380358 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 IGLV3-25P01717 112 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 FAM74A3Q4VXF1 159 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 LOC101059948A0A1B0GTJ6 334 aa10.62□□□□□ -0.71
CHD3-203ENST00000380358 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
CHD3-203ENST00000380358 TFF1P04155 84 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 MEF2CQ06413 473 aaPredicted RBP10.61□□□□□ -0.71
CHD3-203ENST00000380358 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 KCNE5Q9UJ90 142 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 LBHQ53QV2 105 aaPredicted RBP10.61□□□□□ -0.71
CHD3-203ENST00000380358 M0QZK8 103 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 BGLAPP02818 100 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 CKS1BP61024 79 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 CLDND2Q8NHS1 167 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 ELF5Q9UKW6 265 aaPredicted RBP10.61□□□□□ -0.71
CHD3-203ENST00000380358 KCNE1BA0A087WTH5 132 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 HBDP02042 147 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 GCSAMQ8N6F7 178 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 CDC42EP3Q9UKI2 254 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 SSC5DA1L4H1 1573 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 HLA-DRB1P01911 266 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 FOLR2P14207 255 aa10.61□□□□□ -0.71
CHD3-203ENST00000380358 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 SIGLEC12Q96PQ1 595 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 SRXN1Q9BYN0 137 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 GATA2P23769 480 aaPredicted RBP10.6□□□□□ -0.71
CHD3-203ENST00000380358 SMRP1Q8NCR6 262 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 PEMTQ9UBM1 199 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 SLC25A15Q9Y619 301 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 TRAV30A0A087WSZ9 112 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 OR11H12B2RN74 326 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 IGKV1D-16P01601 117 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 C3orf56Q8N813 242 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 OR11H1Q8NG94 326 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 GPR146Q96CH1 333 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 CBLN4Q9NTU7 201 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 FAM74A7A6NL05 159 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 PGLYRP1O75594 196 aaPredicted RBP10.6□□□□□ -0.71
CHD3-203ENST00000380358 APOHP02749 345 aaPredicted RBP10.6□□□□□ -0.71
CHD3-203ENST00000380358 ABHD17AQ96GS6 310 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 LINC00596Q86U02 117 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
CHD3-203ENST00000380358 MARS2Q96GW9 593 aaKnown RBP10.6□□□□□ -0.71
CHD3-203ENST00000380358 BCL2P10415 239 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 UBE2E2Q96LR5 201 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 IGKV1D-42A0A075B6H8 117 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 FGF12P61328 243 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 TEX45Q8NA69 505 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 MARCH11A6NNE9 402 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 APOBEC3AP31941 199 aaPredicted RBP10.59□□□□□ -0.71
CHD3-203ENST00000380358 DNM1P46Q6ZS02 220 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 JPT2Q9H910 190 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 CRIM1Q9NZV1 1036 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 H0YL77 283 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 H7C1H1 209 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 SLC17A3O00476 420 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 LRRC3BQ96PB8 259 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 DLL3Q9NYJ7 618 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 LSM4Q9Y4Z0 139 aaKnown RBP10.59□□□□□ -0.71
CHD3-203ENST00000380358 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 C8orf88P0DMB2 117 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 CBLN1P23435 193 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 SLIRPQ9GZT3 109 aaKnown RBP10.59□□□□□ -0.71
CHD3-203ENST00000380358 AICDAQ9GZX7 198 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 C7orf66A4D0T2 115 aa10.59□□□□□ -0.71
CHD3-203ENST00000380358 PEBP1P30086 187 aaKnown RBP10.59□□□□□ -0.71
CHD3-203ENST00000380358 CASP8AP2Q9UKL3 1982 aa10.58□□□□□ -0.71
CHD3-203ENST00000380358 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
CHD3-203ENST00000380358 NPIPB8E9PQR5 432 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 NPIPB9F8W1W9 429 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 NPIPB7O75200 414 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 SLC22A18ASQ8N1D0 253 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 OR9G1Q8NH87 305 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 TMEM45BQ96B21 275 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms