RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SERF2P84101 59 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 BSPH1Q075Z2 132 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 TBR1Q16650 682 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 MBD3L1Q8WWY6 194 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 SDSLQ96GA7 329 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 OR6C3Q9NZP0 311 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNRD1Q9P1U0 126 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 TNCP24821 2201 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 KBTBD11-OT1A0A1B0GTJ5 212 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF727A8MUV8 499 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 HPRT1P00492 218 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 HSPB1P04792 205 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 OR4A8P0C604 315 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 PTAFRP25105 342 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 TLE1Q04724 770 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ADIPOQQ15848 244 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 LBHQ53QV2 105 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM41BQ5BJD5 291 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM108Q6UXF1 575 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF429Q86V71 674 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM24BQ8N5W8 94 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 NUP37Q8NFH4 326 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 OR10P1Q8NGE3 313 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 RAB39BQ96DA2 213 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 LAMP3Q9UQV4 416 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ARFGEF3Q5TH69 2177 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 SAA2-SAA4A0A096LPE2 208 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 hCG_1809904A0A1W2PP81 198 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 A0A1W2PR64 198 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 A0A1W2PRV1 198 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZZEF1O43149 2961 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 IFNA17P01571 189 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 SAA2P0DJI9 122 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 PAX6P26367 422 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 GPX4P36969 197 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 RHEBQ15382 184 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 PRAMEF5Q5TYX0 476 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ADAM5Q6NVV9 412 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF788Q6ZQV5 615 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 DDB2Q92466 427 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 GFOD1Q9NXC2 390 aa6.56□□□□□ -1.36
PDLIM5-204ENST00000380176 DLL1O00548 723 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 FCN3O75636 299 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 FGF7P21781 194 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 KHDC3LQ587J8 217 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 CENPVQ7Z7K6 275 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TNFRSF14Q92956 283 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 S1PR3Q99500 378 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM147Q9BVK8 224 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TMPRSS5Q9H3S3 457 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TUBA4BQ9H853 241 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 A0A0U1RQK1 487 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF320A2RRD8 509 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TMPRSS2O15393 492 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 IFNA4P05014 189 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 BCL2P10415 239 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 RAB11AP62491 216 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 DLK1P80370 383 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 SLC25A22Q9H936 323 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 JKAMPQ9P055 326 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF835Q9Y2P0 537 aa6.55□□□□□ -1.36
PDLIM5-204ENST00000380176 TRGV10A0A0A0MS01 117 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 XKRY2A2RUG3 117 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 FOLR2P14207 255 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 MDKP21741 143 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 LYG1Q8N1E2 194 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 Q8N7P7 452 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF383Q8NA42 475 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF439Q8NDP4 499 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 OR4A16Q8NH70 328 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 CA5BP1Q8WTZ4 195 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 NPCDR1Q9BY65 106 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM140Q9NV12 185 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 ELOVL5Q9NYP7 299 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 CISD1Q9NZ45 108 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 IGF2RP11717 2491 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 LRBAP50851 2863 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 C17orf100A8MU93 164 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 K7ENP7 123 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 RRHO14718 337 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 MYOD1P15172 320 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 GNB2P62879 340 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 ATP6V1FQ16864 119 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 VWC2Q2TAL6 325 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 ABHD12Q8N2K0 398 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 GATAD1Q8WUU5 269 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 NEUROG1Q92886 237 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms