RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SCRT2Q9NQ03 307 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 TRBV9A0A0B4J1U6 114 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 OR4C46A6NHA9 309 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SHISA8B8ZZ34 492 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 H3BRM9 83 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SLC17A3O00476 420 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SCRG1O75711 98 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 CRYBB3P26998 211 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SRIP30626 198 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SEC11AP67812 179 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 MRPL14Q6P1L8 145 aaKnown RBP6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF525Q8N782 197 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF439Q8NDP4 499 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 GALMQ96C23 342 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 CITED1Q99966 193 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 UNC80Q8N2C7 3258 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 A0A0G2JLM5 398 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 GPR183P32249 361 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 UQCRFS1P47985 274 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 RPL27P61353 136 aaKnown RBP6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ARL16Q0P5N6 197 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 STPG3Q8N7X2 389 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF418Q8TF45 676 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SPIN2AQ99865 258 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 SPIN2BQ9BPZ2 258 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ALKBH4Q9NXW9 302 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 ARL2-SNX15V9GYD0 113 aa6.29□□□□□ -1.4
CDKL5-201ENST00000379989 PDE4DIPQ5VU43 2346 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 PCDH15Q96QU1 1955 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 IGHV5-10-1A0A0J9YXX1 117 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 BMPR1BO00238 502 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 NDUFB4O95168 129 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 CRYAAP02489 173 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 FAM87AP0C7U9 286 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 PTGDSP41222 190 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 AESQ08117 197 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 LRRC75BQ2VPJ9 315 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 C6orf201Q7Z4U5 140 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 VSTM2AQ8TAG5 236 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 APOBEC3DQ96AK3 386 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-201ENST00000379989 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 TMEM222Q9H0R3 208 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 CLCF1Q9UBD9 225 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 EXPH5Q8NEV8 1989 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 TMED7-TICAM2A0A0A6YYA0 188 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 IGLV1-36A0A0B4J1U3 117 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 LY6G6EA0A0G2JKS1 128 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 C3orf85A0A1B0GTC6 90 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF850A8MQ14 1090 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 B9A039 149 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 SLC16A7O60669 478 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 ATP5J2P56134 94 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 ATP5G2Q06055 141 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 PSG7Q13046 419 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 OR1F12Q8NHA8 337 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 SPXQ9BT56 116 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 C12orf49Q9H741 205 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 U3KQA8 63 aa6.28□□□□□ -1.4
CDKL5-201ENST00000379989 DEGS1O15121 323 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 CTLA4P16410 223 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 USF1P22415 310 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-201ENST00000379989 HTR1DP28221 377 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 ARL3P36405 182 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 MYBPHQ13203 477 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 TNXAQ16473 311 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 ACSM6Q6P461 480 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 TMEM136Q6ZRR5 245 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 C1QL2Q7Z5L3 287 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 C1orf210Q8IVY1 113 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 HARBI1Q96MB7 349 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 GPR82Q96P67 336 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 YAE1D1Q9NRH1 226 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 MUC3AQ02505 3323 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 CTXND1A0A1B0GTU2 59 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 B5MCH6 92 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 OR1D4P47884 311 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 FABP6P51161 128 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 GAGE5Q13069 117 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 GAGE6Q13070 117 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 TMEM97Q5BJF2 176 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 DMRTC1Q5HYR2 192 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 DOLPP1Q86YN1 238 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF695Q8IW36 515 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 NECAP2Q9NVZ3 263 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 IL36GQ9NZH8 169 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 LHFPL6Q9Y693 200 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 M0R2Z0 102 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 MT-ND6P03923 174 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 ATP5G3P48201 142 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 EGR4Q05215 589 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms