RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 GREM1O60565 184 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 PARP14Q460N5 1801 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 NUDT3O95989 172 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF256Q9Y2P7 627 aaPredicted RBP10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 TAF1LQ8IZX4 1826 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 C1QTNF9BB2RNN3 333 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 C1QTNF9P0C862 333 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 ACSF3Q4G176 576 aaPredicted RBP10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF506Q5JVG8 444 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 ITLN1Q8WWA0 313 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 IDI2-AS1Q9NZ38 188 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 TCF20Q9UGU0 1960 aaKnown RBP10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 C7orf71A4D174 169 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 LINC00587B1AMM8 73 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 MGST3O14880 152 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 CD33P20138 364 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 CBLN1P23435 193 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 MAS1LP35410 378 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 RPL27AP46776 148 aaKnown RBP10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 WNT10AQ9GZT5 417 aa10.23□□□□□ -0.77
PCDHA9-201ENST00000378122 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 EGR1P18146 543 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SRSF7Q16629 238 aaKnown RBP eCLIP10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SHISA5Q8N114 240 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM54Q969K7 222 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 MSGN1A6NI15 193 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 MRAP2Q96G30 205 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 ZNF430Q9H8G1 570 aaPredicted RBP10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 TRAV14DV4A0A0A6YYC5 116 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SMIM10L1P0DMW3 83 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 BIVMQ86UB2 503 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SPSB4Q96A44 273 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SMIM10Q96HG1 83 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SS18L1O75177 396 aaPredicted RBP10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 HLA-DRB1P01911 266 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 EGR4Q05215 589 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 CCDC144NLQ6NUI1 221 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 ABHD12Q8N2K0 398 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 SMIM8Q96KF7 97 aa10.22□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A10PA6NDY2 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A18PA6NE21 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A16PA6NEW6 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A20PA6NIJ5 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A8PA6NJQ4 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A7PA6NKC0 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A22PA8MWA6 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 TMEM14DPA8MWL7 114 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A12PA8MX19 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A5PA8MXJ8 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A23PA8MXZ1 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A15PP0C7V4 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A13PP0C7W8 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A14PP0C7W9 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FAM90A24PP0C7X0 464 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 MAP1LC3AQ9H492 121 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 NRXN2Q9P2S2 1712 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 MPV17P39210 176 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 ADIPOQQ15848 244 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 PSME4Q14997 1843 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 SRD5A1P18405 259 aa10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 RPL8P62917 257 aaKnown RBP10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 SP7Q8TDD2 431 aaPredicted RBP10.21□□□□□ -0.77
PCDHA9-201ENST00000378122 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 MARCH11A6NNE9 402 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 MRPL13Q9BYD1 178 aaKnown RBP10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 WNT5BQ9H1J7 359 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 CALYQ9NYX4 217 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 POLEQ07864 2286 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 ZNF815PA8K554 130 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 RND2P52198 227 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 PPP1R32Q7Z5V6 425 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 SRSF12Q8WXF0 261 aaKnown RBP10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 SSBP3Q9BWW4 388 aaPredicted RBP10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 TMEM78Q5T7P6 136 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 OR4A5Q8NH83 315 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 MARS2Q96GW9 593 aaKnown RBP10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 MOB4Q9Y3A3 225 aa10.21□□□□□ -0.78
PCDHA9-201ENST00000378122 F5P12259 2224 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 P2RY6Q15077 328 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 A0A0G2JK05 382 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 C9JCJ5 164 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 LDLRAD4O15165 306 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 OR10J6PQ8NGY7 276 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 IMMP2LQ96T52 175 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms