RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 TSSC4Q9Y5U2 329 aaPredicted RBP4.52□□□□□ -1.69
SSX3-202ENST00000376893 URGCP-MRPS24S4R325 110 aa4.52□□□□□ -1.69
SSX3-202ENST00000376893 V9GY05 133 aa4.52□□□□□ -1.69
SSX3-202ENST00000376893 CSPG4Q6UVK1 2322 aa4.52□□□□□ -1.69
SSX3-202ENST00000376893 ANK2Q01484 3957 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SETD2Q9BYW2 2564 aaPredicted RBP4.51□□□□□ -1.69
SSX3-202ENST00000376893 IGKV1-27A0A075B6S5 117 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 IGHV1OR15-1A0A075B7D0 117 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 IGHV7-81A0A0B4J1V7 117 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 TRAV40A0A0B4J280 105 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 IGKV1-9A0A0C4DH69 117 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 PQLC2LA1A4F0 135 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 TMEM210A6NLX4 147 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 A8MXK9 166 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 B4DSR2 109 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SMKR1H3BMG3 65 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 J3QT63 122 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SNAI2O43623 268 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OXTP01178 125 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 FSHBP01225 129 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 HTR1AP08908 422 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 MYL12AP19105 171 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 RAB4AP20338 218 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 GLP1RP43220 463 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 HAAOP46952 286 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 DLX1P56177 255 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 ERVK11-1P61568 191 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 CDK5R1Q15078 307 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 ZNF181Q2M3W8 571 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 RGS21Q2M5E4 152 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 CEACAM21Q3KPI0 293 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 CHRFAM7AQ494W8 412 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 CLVS2Q5SYC1 327 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 TEX36Q5VZQ5 186 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 LRRC28Q86X40 367 aaPredicted RBP4.51□□□□□ -1.69
SSX3-202ENST00000376893 CALHM1Q8IU99 346 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 ZNF676Q8N7Q3 588 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 BPIFB6Q8NFQ5 453 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OR8B3Q8NGG8 313 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OR5D18Q8NGL1 313 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OR10R2Q8NGX6 335 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 VN1R17PQ8TDU5 208 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 C22orf15Q8WYQ4 148 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 Q96MT0 163 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 GAFA1Q96PS6 74 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SPACA5Q96QH8 159 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OR8B2Q96RD0 313 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 CCL13Q99616 98 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 RARRES2Q99969 163 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SRRQ9GZT4 340 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OR51I2Q9H344 312 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 BEX1Q9HBH7 125 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 C8orf4Q9NR00 106 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 TAS2R4Q9NYW5 299 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 RNF7Q9UBF6 113 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 OPN4Q9UHM6 478 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 ZNF391Q9UJN7 358 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 MPC1Q9Y5U8 109 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 SOX21Q9Y651 276 aaPredicted RBP4.51□□□□□ -1.69
SSX3-202ENST00000376893 C2CD3Q4AC94 2353 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 HIVEP2P31629 2446 aa4.51□□□□□ -1.69
SSX3-202ENST00000376893 IGKV1D-17A0A075B6S4 117 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 TRAV9-2A0A087WT02 112 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 A0A0A6YYH2 397 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 A0A0G2JMP0 313 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 A0A0X1KG70 313 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 MDFIC2A0A1B0GVS7 189 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 ANKRD20A5PA0PJZ0 165 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 A6NJ64 397 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 SRRM5B3KS81 715 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 CLDN34H7C241 214 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 MYL12BO14950 172 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 NRASP01111 189 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 LHBP01229 141 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 MAS1LP35410 378 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 GPX4P36969 197 aaPredicted RBP4.5□□□□□ -1.69
SSX3-202ENST00000376893 SRP14P37108 136 aaKnown RBP4.5□□□□□ -1.69
SSX3-202ENST00000376893 UBE2G2P60604 165 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 GNB2P62879 340 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 GNG3P63215 75 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 Q6ZN92 141 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 NOTCH2NLQ7Z3S9 236 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 ANGPTL5Q86XS5 388 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 DUSP18Q8NEJ0 188 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 OR4M2Q8NGB6 313 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 OR51A2Q8NGJ7 313 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 AQP3Q92482 292 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 FGGYQ96C11 551 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 PGLYRP3Q96LB9 341 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 CNBD2Q96M20 576 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 OR5B12Q96R08 314 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 NRIP2Q9BQI9 281 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 BEX2Q9BXY8 128 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 ABCB9Q9NP78 766 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 RBFOX1Q9NWB1 397 aaKnown RBP4.5□□□□□ -1.69
SSX3-202ENST00000376893 CLEC5AQ9NY25 188 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 CALYQ9NYX4 217 aa4.5□□□□□ -1.69
SSX3-202ENST00000376893 ZNF222Q9UK12 451 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms