RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ZNF585BQ52M93 769 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 ATG4DQ86TL0 474 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-205ENST00000376636 APOHP02749 345 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-205ENST00000376636 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-205ENST00000376636 UNQ5815/PRO19632Q6UWF5 114 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 TUBA4BQ9H853 241 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 H0YL77 283 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 DTX2Q86UW9 622 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 IGHV5-51A0A0C4DH38 117 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 FOXI3A8MTJ6 420 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-205ENST00000376636 UCP3P55916 312 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 A0A1W2PP11 408 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 PATE4P0C8F1 98 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 GPR183P32249 361 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 TMEM42Q69YG0 159 aa10.04□□□□□ -0.8
VPS13A-205ENST00000376636 LINC00614P0C842 121 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-205ENST00000376636 SEMA5BQ9P283 1151 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 RND2P52198 227 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 TBR1Q16650 682 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 WDR82Q6UXN9 313 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 LINC00305Q7Z4B0 112 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 HOXD4P09016 255 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-205ENST00000376636 CXCL2P19875 107 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 GAGE13Q4V321 117 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 RIPPLY2Q5TAB7 128 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 RASL10BQ96S79 203 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 MAGEA5P43359 124 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 DEFB123Q8N688 67 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 RNASEH2CQ8TDP1 164 aaKnown RBP10.03□□□□□ -0.8
VPS13A-205ENST00000376636 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 TGFAP01135 160 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 H3BUT2 72 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 FSTP19883 344 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 GGTLC2Q14390 218 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 M0R381 172 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 GPR6P46095 362 aaPredicted RBP10.03□□□□□ -0.8
VPS13A-205ENST00000376636 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 SPTAN1Q13813 2472 aaKnown RBP10.03□□□□□ -0.8
VPS13A-205ENST00000376636 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
VPS13A-205ENST00000376636 MYOGP15173 224 aa10.02□□□□□ -0.8
VPS13A-205ENST00000376636 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.8
VPS13A-205ENST00000376636 UNQ9370/PRO34162Q6UXP9 181 aa10.02□□□□□ -0.8
VPS13A-205ENST00000376636 LINC01549A6NIU2 74 aa10.02□□□□□ -0.8
VPS13A-205ENST00000376636 HIST1H4AP62805 103 aaKnown RBP10.02□□□□□ -0.8
VPS13A-205ENST00000376636 HMGCLL1Q8TB92 370 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 ZNF729A6NN14 1252 aaPredicted RBP10.02□□□□□ -0.81
VPS13A-205ENST00000376636 MPV17P39210 176 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 M0R2P5 195 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 RND3P61587 244 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 PCSK4Q6UW60 755 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 MIXL1Q9H2W2 232 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 P2RY6Q15077 328 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 ZNF660Q6AZW8 331 aaPredicted RBP10.02□□□□□ -0.81
VPS13A-205ENST00000376636 GUSBP11Q6P575 273 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 OR4D11Q8NGI4 311 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 SMIM8Q96KF7 97 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 IGLV3-16A0A075B6K0 115 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 TLNRD1Q9H1K6 362 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 LHX9Q9NQ69 397 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 FBLN7Q53RD9 439 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 LDLRAD4O15165 306 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
VPS13A-205ENST00000376636 ADRA2AP08913 450 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 LEPP41159 167 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 SEC11AP67812 179 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 FAM89BQ8N5H3 189 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 VGLL1Q99990 258 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 SAA1P0DJI8 122 aaPredicted RBP10.01□□□□□ -0.81
VPS13A-205ENST00000376636 FGFRL1Q8N441 504 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 IL36BQ9NZH7 164 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 A0A087WWC5 75 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 PTGDSP41222 190 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 C9JCJ5 164 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 GATAD1Q8WUU5 269 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 GSN-AS1Q9NRJ2 163 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 TRAV24A0A0B4J272 114 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 MORN3Q6PF18 240 aaPredicted RBP10.01□□□□□ -0.81
VPS13A-205ENST00000376636 CBLN3Q6UW01 205 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 SSC4DQ8WTU2 575 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 THADAQ6YHU6 1953 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 TMEM238C9JI98 176 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 FNDC4Q9H6D8 234 aaPredicted RBP10.01□□□□□ -0.81
VPS13A-205ENST00000376636 WDR54Q9H977 334 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 CACNA1BQ00975 2339 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
VPS13A-205ENST00000376636 WNK3Q9BYP7 1800 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms