RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RRHO14718 337 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 SUPT4H1P63272 117 aaKnown RBP9.79□□□□□ -0.84
PTCH1-203ENST00000375274 C18orf12Q96KH6 178 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 LYZL4Q96KX0 146 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 RLFQ13129 1914 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 ICAM4Q14773 271 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 NRN1LQ496H8 165 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 C19orf24Q9BVV8 132 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 FAM117AQ9C073 453 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 SCN8AQ9UQD0 1980 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 PKDREJQ9NTG1 2253 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 AMY1AP04745 511 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 ID3Q02535 119 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 CENPWQ5EE01 88 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 C12orf54Q6X4T0 127 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 IMMP1LQ96LU5 166 aa9.79□□□□□ -0.84
PTCH1-203ENST00000375274 COLCA2A8K830 154 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 SLC25A17O43808 307 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 CYTL1Q9NRR1 136 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 CD40P25942 277 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF441Q8N8Z8 693 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 TIMP4Q99727 224 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 IDI2-AS1Q9NZ38 188 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 PHF3Q92576 2039 aaKnown RBP9.78□□□□□ -0.84
PTCH1-203ENST00000375274 LOC389332A0A1B0GUA5 103 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 NKX2-8O15522 239 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 MAS1LP35410 378 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 CA7P43166 264 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 CCL20P78556 96 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 TMEM177Q53S58 311 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 KLHDC3Q9BQ90 382 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 SSBP3Q9BWW4 388 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-203ENST00000375274 ZFP30Q9Y2G7 519 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 UBE2CO00762 179 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 CELA3AP09093 270 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
PTCH1-203ENST00000375274 HOXA4Q00056 320 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-203ENST00000375274 TFF3Q07654 80 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 ZNRF1Q8ND25 227 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 SGK494Q96LW2 274 aa9.78□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BKO60814 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BJP06899 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 FOLR2P14207 255 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BOP23527 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BBP33778 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BDP58876 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BCP62807 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.84
PTCH1-203ENST00000375274 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.84
PTCH1-203ENST00000375274 FGF11Q92914 225 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.84
PTCH1-203ENST00000375274 ZNF703Q9H7S9 590 aaPredicted RBP9.77□□□□□ -0.84
PTCH1-203ENST00000375274 CIDEAO60543 219 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 RPL7P18124 248 aaKnown RBP9.77□□□□□ -0.85
PTCH1-203ENST00000375274 NMUP48645 174 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 KRTCAP3Q53RY4 240 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 LRTM2Q8N967 370 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 WDYHV1Q96HA8 205 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 DIRC2Q96SL1 478 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-203ENST00000375274 HSPB7Q9UBY9 170 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF716A6NP11 495 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 IFNL4K9M1U5 179 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 BMI1P35226 326 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF146Q15072 292 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 ATOH7Q8N100 152 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 NPIPB3Q92617 1050 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 WBP1Q96G27 269 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 MESP1Q9BRJ9 268 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 SLC17A3O00476 420 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 IL6RP08887 468 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-203ENST00000375274 ATP5G3P48201 142 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 RPL39P5Q59GN2 51 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 OR4A47Q6IF82 309 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 SLC25A34Q6PIV7 304 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF788Q6ZQV5 615 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
PTCH1-203ENST00000375274 DOCK7Q96N67 2140 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 IGLV3-32A0A0A0MS00 114 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 ATP5IP56385 69 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-203ENST00000375274 Q6ZT83 130 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 SIGLEC12Q96PQ1 595 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 MRPL37Q9BZE1 423 aaKnown RBP9.76□□□□□ -0.85
PTCH1-203ENST00000375274 WFDC1Q9HC57 220 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 CA2P00918 260 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 TCTAP57738 103 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 HEPN1Q6WQI6 88 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 LINC00469Q8N7U9 141 aa9.76□□□□□ -0.85
PTCH1-203ENST00000375274 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms