RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 IGHV3-21A0A0B4J1V1 117 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 LOC389332A0A1B0GUA5 103 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 CTAG1AP78358 180 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 MBD3L1Q8WWY6 194 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 FAM166AQ6J272 317 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 OR4D5Q8NGN0 318 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 OSR1Q8TAX0 266 aaPredicted RBP17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
TGFBR1-202ENST00000374994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.96■□□□□ 0.46
TGFBR1-202ENST00000374994 RBPMS2Q6ZRY4 209 aaKnown RBP17.96■□□□□ 0.46
TGFBR1-202ENST00000374994 OR4C46A6NHA9 309 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BKO60814 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 PLAUP00749 431 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BJP06899 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BOP23527 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BBP33778 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BDP58876 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BCP62807 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST2H2BEQ16778 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 PPP1R32Q7Z5V6 425 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BHQ93079 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 WFIKKN1Q96NZ8 548 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BNQ99877 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HIST1H2BMQ99879 126 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 PILRBQ9UKJ0 227 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A087WV48 116 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 ZIC3O60481 467 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 HCP5Q6MZN7 132 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 ZNF441Q8N8Z8 693 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 LOXL4Q96JB6 756 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 TRBV24-1A0A075B6N3 115 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 EGR1P18146 543 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 RAB9AP51151 201 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 SRSF7Q16629 238 aaKnown RBP eCLIP17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 MIEN1Q9BRT3 115 aa17.95■□□□□ 0.46
TGFBR1-202ENST00000374994 EFEMP2O95967 443 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A1W2PRD5 423 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A1W2PRF3 423 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A1W2PRM7 423 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 CDX4O14627 284 aaPredicted RBP17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 ACP7Q6ZNF0 438 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 IFI27L2Q9H2X8 130 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 PEF1Q9UBV8 284 aaKnown RBP17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 SRSF12Q8WXF0 261 aaKnown RBP17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 TRAV1-1A0A0B4J248 108 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 RRHO14718 337 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 SLC25A17O43808 307 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 MGPP08493 103 aa17.94■□□□□ 0.46
TGFBR1-202ENST00000374994 TIAF1O95411 115 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 JOSD1Q15040 202 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 TBL2Q9Y4P3 447 aaKnown RBP17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 LOC102724200A0A096LPH7 203 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 APELAP0DMC3 54 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 ID1P41134 155 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 PCP4P48539 62 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 Q6ZT83 130 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 FAM90A1Q86YD7 464 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 FOXD3Q9UJU5 478 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 TFF3Q07654 80 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 RTP5Q14D33 572 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 MFAP4P55083 255 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 ZNF703Q9H7S9 590 aaPredicted RBP17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 CYB5R2Q6BCY4 276 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 FAM131CQ96AQ9 280 aa17.93■□□□□ 0.46
TGFBR1-202ENST00000374994 PATJQ8NI35 1801 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 KCNS1Q96KK3 526 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 CACNG8Q8WXS5 425 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 NPIPB3Q92617 1050 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 C17orf98A8MV24 154 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 FOXC1Q12948 553 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 VWCEQ96DN2 955 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A1B0GW15 77 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 SHISA5Q8N114 240 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 UQCRFS1P47985 274 aa17.92■□□□□ 0.46
TGFBR1-202ENST00000374994 SAPCD1Q5SSQ6 148 aa17.91■□□□□ 0.46
TGFBR1-202ENST00000374994 CDCP2Q5VXM1 449 aa17.91■□□□□ 0.46
TGFBR1-202ENST00000374994 CABIN1Q9Y6J0 2220 aa17.91■□□□□ 0.46
TGFBR1-202ENST00000374994 LOC285556D6RIA3 1793 aa17.91■□□□□ 0.46
TGFBR1-202ENST00000374994 A0A0A6YYD4 124 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 ZNHIT1O43257 154 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 TCTAP57738 103 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 TBR1Q16650 682 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 IMMP1LQ96LU5 166 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 LYZL4Q96KX0 146 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 SSBP3Q9BWW4 388 aaPredicted RBP17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 IMMP2LQ96T52 175 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 AREGP15514 252 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 ATP5G3P48201 142 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 C1orf162Q8NEQ5 155 aaPredicted RBP17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 PRDM13Q9H4Q3 707 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 WFDC1Q9HC57 220 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 TM4SF5O14894 197 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 ZNF841Q6ZN19 808 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 VKORC1L1Q8N0U8 176 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 LTBP1Q14766 1721 aa17.9■□□□□ 0.46
TGFBR1-202ENST00000374994 SNRPCP09234 159 aaKnown RBP17.89■□□□□ 0.46
TGFBR1-202ENST00000374994 TIMP4Q99727 224 aa17.89■□□□□ 0.46
TGFBR1-202ENST00000374994 M0R3E3 92 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms