RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 A0A087WYN8 130 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 TRAV1-1A0A0B4J248 108 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 IGHV2OR16-5A0A0B4J2B6 119 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 IGHV1-18A0A0C4DH31 117 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 A0A1W2PRV1 198 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 C12orf77C9JDV5 145 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 H0YL77 283 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 AGPAT2O15120 278 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 PPIHO43447 177 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 NDUFA2O43678 99 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 SYNGR2O43760 224 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 CHST1O43916 411 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 TNFSF13O75888 250 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 CGAP01215 116 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 IGKV1-5P01602 117 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 HBE1P02100 147 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 OR8U8P0C7N1 319 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 P0C879 139 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 FOLR2P14207 255 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 PPP1CCP36873 323 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 OR3A1P47881 315 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 FHITP49789 147 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 PPT1P50897 306 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 EIF4EBP1Q13541 118 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 CLINT1Q14677 625 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 IGFBP7Q16270 282 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 SMIM21Q3B7S5 101 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 ZNF718Q3SXZ3 478 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 ZNF672Q499Z4 452 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 IGFL3Q6UXB1 125 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 WDR82Q6UXN9 313 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 BHLHA15Q7RTS1 189 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 CBLN2Q8IUK8 224 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 DRAM1Q8N682 238 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 ZNF645Q8N7E2 425 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 C15orf54Q8N8G6 183 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 OR2G3Q8NGZ4 309 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 OR51H1Q8NH63 302 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 RNASE11Q8TAA1 199 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 FAM213BQ8TBF2 198 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 IL1F10Q8WWZ1 152 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 RBMXL1Q96E39 390 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 COQ2Q96H96 371 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 PARD6GQ9BYG4 376 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 NPFFR1Q9GZQ6 430 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 EGLN1Q9GZT9 426 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 MAGT1Q9H0U3 335 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 SLC35B3Q9H1N7 401 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 ZNF71Q9NQZ8 489 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 SMCO4Q9NRQ5 59 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 KCNIP1Q9NZI2 227 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 CACNG5Q9UF02 275 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 SH3BGRL2Q9UJC5 107 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 RNF150Q9ULK6 438 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 KCNS2Q9ULS6 477 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 MMP24Q9Y5R2 645 aa3.93□□□□□ -1.78
USP48-202ENST00000374730 KLF2Q9Y5W3 355 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 CNOT1A5YKK6 2376 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 EP300Q09472 2414 aaPredicted RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 DIDO1Q9BTC0 2240 aaKnown RBP3.93□□□□□ -1.78
USP48-202ENST00000374730 FLNBO75369 2602 aaKnown RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 NCOR2Q9Y618 2525 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 CACNA1DQ01668 2161 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 TRAV39A0A0B4J263 110 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 OR5H1A6NKK0 313 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 COLCA2A8K830 154 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 TIMM8AO60220 97 aaPredicted RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 CST7O76096 145 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 IFNA5P01569 189 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 HBZP02008 142 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 HSPB1P04792 205 aaKnown RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 OMGP23515 440 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 NFYBP25208 207 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 IL2RGP31785 369 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 CFHR2P36980 270 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 CEACAM6P40199 344 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 ASCL1P50553 236 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 RAB2AP61019 212 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 HBG1P69891 147 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 HBG2P69892 147 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 TLE4Q04727 773 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 FAM27E3Q08E93 113 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 CATR1Q13166 79 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 RHEBQ15382 184 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 DEFB109BQ30KR1 87 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 ZNF506Q5JVG8 444 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 AKR1C8PQ5T2L2 129 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 AVPI1Q5T686 147 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 ETFRF1Q6IPR1 90 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 TMEM14EPQ6UXP3 125 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 Q6ZR03 302 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 Q6ZS92 163 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 CENPVQ7Z7K6 275 aaPredicted RBP3.92□□□□□ -1.78
USP48-202ENST00000374730 ZNF329Q86UD4 541 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 ZADH2Q8N4Q0 377 aa3.92□□□□□ -1.78
USP48-202ENST00000374730 OR10G4Q8NGN3 311 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms