RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 OR10AC1Q8NH08 325 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 SPENQ96T58 3664 aaKnown RBP5.4□□□□□ -1.55
PTPN3-202ENST00000374541 A0A0U1RQV5 110 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 C1QAP02745 245 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 TRGC2P03986 189 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 BIVMQ86UB2 503 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 LINC01555Q8NAE3 123 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 SPSB4Q96A44 273 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 HSF4Q9ULV5 492 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 B4DSR2 109 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 PSG2P11465 335 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 MMDQ15546 238 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 PUSL1Q8N0Z8 303 aaKnown RBP5.4□□□□□ -1.55
PTPN3-202ENST00000374541 PSMG3Q9BT73 122 aaPredicted RBP5.4□□□□□ -1.55
PTPN3-202ENST00000374541 KLF2Q9Y5W3 355 aaPredicted RBP5.4□□□□□ -1.55
PTPN3-202ENST00000374541 CFAP47Q6ZTR5 3102 aa5.4□□□□□ -1.55
PTPN3-202ENST00000374541 CEACAM18A8MTB9 384 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ATP5LO75964 103 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 NTN1O95631 604 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ANOS1P23352 680 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 VDAC2P45880 294 aaPredicted RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 RPS11P62280 158 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 SAPCD1Q5SSQ6 148 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 LAMTOR1Q6IAA8 161 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 LINC01356Q8N9X3 169 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 DDB2Q92466 427 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 QTRT1Q9BXR0 403 aaKnown RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 DXOO77932 396 aaKnown RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 IFI6P09912 130 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 FAM106CPP0CH98 169 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 AGAP20933 346 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ZP4Q12836 540 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF506Q5JVG8 444 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 TSPO2Q5TGU0 170 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF714Q96N38 554 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 TIMP4Q99727 224 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ZMAT4Q9H898 229 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 PLSCR2Q9NRY7 297 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 TGIF2-C20orf24A0A0A6YYL0 155 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 NGFRP08138 427 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 FCGR3AP08637 254 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ASAH2BP0C7U1 165 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 C8orf88P0DMB2 117 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 HIST1H1AQ02539 215 aaPredicted RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 PLAURQ03405 335 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 CD69Q07108 199 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 DEFB113Q30KQ7 82 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 SMUG1Q53HV7 270 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 Q6AWC8 147 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 PARLQ9H300 379 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 GPR35Q9HC97 309 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 SLC6A13Q9NSD5 602 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 MYO7BQ6PIF6 2116 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 H3BRM9 83 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 H7C2G1 150 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 NDUFA2O43678 99 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 NDUFB4O95168 129 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 BGLAPP02818 100 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 RNF224P0DH78 156 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 HOXB1P14653 301 aaPredicted RBP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 C10orf128Q5T292 105 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 C10orf111Q8N326 155 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 MRAPQ8TCY5 172 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 VSTM2LQ96N03 204 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 FREM2Q5SZK8 3169 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 CDC42EP2O14613 210 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 PRSS2P07478 247 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 LINC00869P0C866 280 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 ECSCRQ19T08 205 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 TAF15Q92804 592 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN3-202ENST00000374541 MS4A3Q96HJ5 214 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 PRDM14Q9GZV8 571 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 OTOGLQ3ZCN5 2332 aa5.39□□□□□ -1.55
PTPN3-202ENST00000374541 THBDP07204 575 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 LOXL3P58215 753 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF645Q8N7E2 425 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 RBKSQ9H477 322 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GPR179Q6PRD1 2367 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 CDIPTO14735 213 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ANK1P16157 1881 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 WNT5AP41221 380 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GLIPR1P48060 266 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 DLX6P56179 175 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 HBBP68871 147 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 INSL4Q14641 139 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 TM4SF20Q53R12 229 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 TMEM177Q53S58 311 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GPR82Q96P67 336 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 HILPDAQ9Y5L2 63 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 PIEZO1Q92508 2521 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 TMSB15BA0A087X1C1 80 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 A0A1B0GTL3 188 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ARF6P62330 175 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 ZNF79Q15937 498 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 GTSCR1Q86UQ5 136 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 NIT1Q86X76 327 aa5.38□□□□□ -1.55
PTPN3-202ENST00000374541 SAXO1Q8IYX7 474 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms