RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 OR4A47Q6IF82 309 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 ETFRF1Q6IPR1 90 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 BTNL3Q6UXE8 466 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 CLEC9AQ6UXN8 241 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 C1QL4Q86Z23 238 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 MUC15Q8N387 334 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 TPRX1Q8N7U7 411 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 BEND2Q8NDZ0 799 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 SLC24A4Q8NFF2 622 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 OR10G9Q8NGN4 311 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 OR10G7Q8NGN6 311 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 RNASEH2CQ8TDP1 164 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 CA5BP1Q8WTZ4 195 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 LHX4Q969G2 390 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 FLYWCH2Q96CP2 140 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 C5orf30Q96GV9 206 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 RCC1LQ96I51 464 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 SLC35E1Q96K37 410 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 GPHA2Q96T91 129 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 MAP1LC3BQ9GZQ8 125 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 PLEKHA3Q9HB20 300 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 MLXQ9UH92 298 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 TCF19Q9Y242 345 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 TMA7Q9Y2S6 64 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 FAM96BQ9Y3D0 163 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 ZFHX2Q9C0A1 2572 aaPredicted RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 CHD3Q12873 2000 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 MUC6Q6W4X9 2439 aa7.16□□□□□ -1.26
SNRNP40-202ENST00000373720 IGHV3-43A0A0B4J1X8 118 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 IGHV3-64DA0A0J9YX35 117 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 C15orf62A8K5M9 175 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 DEFB108AA8MXU0 73 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 F6UZH7 168 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 H3BP45 60 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 J3QR06 171 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CORTO00230 105 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CLN5O75503 358 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 FAM87AP0C7U9 286 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 IGHV3-43DP0DP04 118 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CD99P14209 185 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CTRB1P17538 263 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 FGF7P21781 194 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 NPY1RP25929 384 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 HOXA1P49639 335 aaPredicted RBP7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 SRSF3P84103 164 aaKnown RBP7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 MEF2BQ02080 365 aaPredicted RBP7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 PAX2Q02962 417 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 AKR1C1Q04828 323 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 ICAM4Q14773 271 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 BSXQ3C1V8 233 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 VMA21Q3ZAQ7 101 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CTRB2Q6GPI1 263 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 OR8G2PQ6IF36 304 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 ALKBH2Q6NS38 261 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 C5orf24Q7Z6I8 188 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 HAPLN4Q86UW8 402 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 ZNF383Q8NA42 475 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 TEX45Q8NA69 505 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 OR1L6Q8NGR2 347 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 OR13D1Q8NGV5 346 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 OR10X1Q8NGY0 326 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 TMEM167AQ8TBQ9 72 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CCL17Q92583 94 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 TCEAL7Q9BRU2 100 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 COMMD5Q9GZQ3 224 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 BIN3Q9NQY0 253 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 CBLN4Q9NTU7 201 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 WASHC3Q9Y3C0 194 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 OR51B2Q9Y5P1 312 aa7.15□□□□□ -1.26
SNRNP40-202ENST00000373720 UBE2L5PA0A1B0GUS4 154 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 OOSP1A8MZH6 123 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 C1orf196B1AJZ1 125 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 M0R036 132 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 CXorf1O96002 111 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 IFNA4P05014 189 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 OR9G9P0C7N8 305 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 CT45A6P0DMU7 189 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 CT45A5P0DMU8 189 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 CT45A7P0DMV0 189 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 CEACAM3P40198 252 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 FHITP49789 147 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 SELENOTP62341 195 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 RHOBP62745 196 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 RUNX1Q01196 453 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 ARL16Q0P5N6 197 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 HNF4GQ14541 408 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 AWAT1Q58HT5 328 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 FFAR4Q5NUL3 377 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM144Q7Z5S9 345 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 S100A7AQ86SG5 101 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 RPP25LQ8N5L8 163 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 FAM216BQ8N7L0 139 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 DEFB108BQ8NET1 73 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms