RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 STAG3L3P0CL85 134 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 IL3RAP26951 378 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 C1orf229Q6ZS94 237 aaPredicted RBP10.54□□□□□ -0.72
CTPS1-202ENST00000372621 C1orf174Q8IYL3 243 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 DEFB123Q8N688 67 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 PATZ1Q9HBE1 687 aaKnown RBP10.54□□□□□ -0.72
CTPS1-202ENST00000372621 ZNF71Q9NQZ8 489 aaPredicted RBP10.54□□□□□ -0.72
CTPS1-202ENST00000372621 GNG12Q9UBI6 72 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 M0R1X1 148 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 MGST3O14880 152 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 TNFSF13O75888 250 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 BMP5P22003 454 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 MZT1Q08AG7 82 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 TMEM37Q8WXS4 190 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 TXNDC17Q9BRA2 123 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 DUSP13Q9UII6 198 aa10.54□□□□□ -0.72
CTPS1-202ENST00000372621 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
CTPS1-202ENST00000372621 NKX2-8O15522 239 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 CGAP01215 116 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 ARL14EPLP0DKL9 152 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 FOXL1Q12952 345 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 GCSAMQ8N6F7 178 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 OR2Z1Q8NG97 314 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 TRGV8A0A0C4DH27 118 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 C1QTNF9P0C862 333 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 FAM78BQ5VT40 261 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 FAM169BQ8N8A8 192 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 OR5T1Q8NG75 326 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 HEYLQ9NQ87 328 aaPredicted RBP10.53□□□□□ -0.72
CTPS1-202ENST00000372621 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
CTPS1-202ENST00000372621 A0A087X0M5 115 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 A0A1B0GX30 115 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 GCGP01275 180 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 CGB3P0DN86 165 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 CGB7P0DN87 165 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 CCL11P51671 97 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 SRSF6Q13247 344 aaKnown RBP10.52□□□□□ -0.72
CTPS1-202ENST00000372621 SPRNQ5BIV9 151 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 UTF1Q5T230 341 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 ABHD12Q8N2K0 398 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 AURKAIP1Q9NWT8 199 aaPredicted RBP10.52□□□□□ -0.72
CTPS1-202ENST00000372621 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.72
CTPS1-202ENST00000372621 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 M0R296 226 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 MIC13Q5XKP0 118 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 LRP11Q86VZ4 500 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 ZNF664Q8N3J9 261 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 STARD4Q96DR4 205 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 FAM234AQ9H0X4 552 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 DSCAMO60469 2012 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 SLC31A2O15432 143 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 CXorf1O96002 111 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 ZNRF1Q8ND25 227 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 S1PR3Q99500 378 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 OPN3Q9H1Y3 402 aaPredicted RBP10.52□□□□□ -0.73
CTPS1-202ENST00000372621 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 SLC25A15Q9Y619 301 aa10.52□□□□□ -0.73
CTPS1-202ENST00000372621 A8MWP6 167 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 ITGB1BP1O14713 200 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 LHBP01229 141 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 KIR2DS2P43631 304 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 CNN1P51911 297 aaKnown RBP10.51□□□□□ -0.73
CTPS1-202ENST00000372621 ERVK-16P61578 105 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 SARAFQ96BY9 339 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 IGHV3OR15-7A0A075B7D8 119 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 C15orf61A6NNL5 157 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 IGHV3-13P01766 116 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 IGHV3-7P01780 117 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 ARSJQ5FYB0 599 aaPredicted RBP10.51□□□□□ -0.73
CTPS1-202ENST00000372621 BHLHA15Q7RTS1 189 aaPredicted RBP10.51□□□□□ -0.73
CTPS1-202ENST00000372621 CHODLQ9H9P2 273 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 TANC2Q9HCD6 1990 aa10.51□□□□□ -0.73
CTPS1-202ENST00000372621 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 GBGT1Q8N5D6 347 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 PPP1R35Q8TAP8 253 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 NCOR1P1Q9H4R4 102 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 ELOVL5Q9NYP7 299 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 CALYQ9NYX4 217 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 TMEM18Q96B42 140 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 YTHDF2Q9Y5A9 579 aaKnown RBP10.5□□□□□ -0.73
CTPS1-202ENST00000372621 A0A0U1RQK1 487 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 SCO2A0A1W2PP80 73 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 ZNF320A2RRD8 509 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 IL6RP08887 468 aaPredicted RBP10.5□□□□□ -0.73
CTPS1-202ENST00000372621 CT45A1Q5HYN5 189 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 SEM1Q6ZVN7 128 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 CT45A3Q8NHU0 189 aa10.5□□□□□ -0.73
CTPS1-202ENST00000372621 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
CTPS1-202ENST00000372621 TMEM14BQ9NUH8 114 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms