RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 PLA2G5P39877 138 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM97Q5BJF2 176 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 ASPHD1Q5U4P2 390 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 LINC00696Q6ZRV3 163 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 OR5A2Q8NGI9 324 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF418Q8TF45 676 aaPredicted RBP10.01□□□□□ -0.81
PTPN1-201ENST00000371621 SIGLEC12Q96PQ1 595 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 LIME1Q9H400 295 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 RARRES3Q9UL19 164 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 H3BTX0 84 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 P01737 135 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 CD46P15529 392 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 ORM2P19652 201 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 RAC1P63000 192 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 FOXL1Q12952 345 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 IL15RAQ13261 267 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 FAM169BQ8N8A8 192 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 RASL10BQ96S79 203 aa10.01□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF138P52744 262 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 S1PR3Q99500 378 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 CITED1Q99966 193 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 HIF1ANQ9NWT6 349 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
PTPN1-201ENST00000371621 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
PTPN1-201ENST00000371621 TSSC4Q9Y5U2 329 aaPredicted RBP10□□□□□ -0.81
PTPN1-201ENST00000371621 XIRP2A4UGR9 3374 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 A0A1W2PRD5 423 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 A0A1W2PRF3 423 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 A0A1W2PRM7 423 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 SLC25A17O43808 307 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 IGHV3-48P01763 117 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 SMIM13P0DJ93 91 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 OR1D5P58170 312 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 LYSMD4Q5XG99 296 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 VKORC1L1Q8N0U8 176 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF114Q8NC26 417 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 FOXB1Q99853 325 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
PTPN1-201ENST00000371621 SPINT1O43278 529 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 GDF1P27539 372 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF726P1Q15940 193 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 C18orf15Q96N68 181 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 RCHY1Q96PM5 261 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 ANAPC13Q9BS18 74 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM38BQ9NVV0 291 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 FZR1Q9UM11 496 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
PTPN1-201ENST00000371621 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 KCNMB1Q16558 191 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 LRRC10Q5BKY1 277 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 C5orf17Q8NAS9 161 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 C12orf49Q9H741 205 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM167BQ9NRX6 74 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 B4GALT7Q9UBV7 327 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 SSUH2Q9Y2M2 353 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 IGHV5-51A0A0C4DH38 117 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 FOXS1O43638 330 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 QRFPP83859 136 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 SPSB4Q96A44 273 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
PTPN1-201ENST00000371621 SPTAN1Q13813 2472 aaKnown RBP9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TRPM7Q96QT4 1865 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 C3orf80F5H4A9 247 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 CT45A10P0DMU9 189 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 Q1RN00 199 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 COA6Q5JTJ3 125 aaKnown RBP9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TEPPQ6URK8 271 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 OR2M7Q8NG81 312 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM45BQ96B21 275 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 MRGPRX1Q96LB2 322 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 PLXNB1O43157 2135 aa9.99□□□□□ -0.81
PTPN1-201ENST00000371621 A0A0G2JRQ6 117 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 TGFBR3LH3BV60 316 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 GCHFRP30047 84 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 CEACAM21Q3KPI0 293 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 RALGAPA2Q2PPJ7 1873 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 TRBV9A0A0B4J1U6 114 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 GATA2P23769 480 aaPredicted RBP9.98□□□□□ -0.81
PTPN1-201ENST00000371621 CEACAM3P40198 252 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 YPEL5P62699 121 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 ANKRD37Q7Z713 158 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 C9orf40Q8IXQ3 194 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 TRAV8-6A0A0B4J262 113 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 MEF2CQ06413 473 aaPredicted RBP9.98□□□□□ -0.81
PTPN1-201ENST00000371621 HSD52Q0P140 79 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms