RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TRIB1Q96RU8 372 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 LIME1Q9H400 295 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 MRPL22Q9NWU5 206 aaKnown RBP5.73□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM160Q9NX00 188 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
CSDE1-204ENST00000369530 FAM230AA0A1W2PPH8 454 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 RER1O15258 196 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 OR7C2O60412 319 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 GALR1P47211 349 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF266Q14584 549 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 SPATA45Q537H7 98 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF880Q6PDB4 577 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 FAM57BQ71RH2 274 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM256Q8N2U0 113 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 FAM213BQ8TBF2 198 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 MARCH1Q8TCQ1 289 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 EMG1Q92979 244 aaKnown RBP5.72□□□□□ -1.49
CSDE1-204ENST00000369530 GNPNAT1Q96EK6 184 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-204ENST00000369530 C4orf45Q96LM5 186 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 LPAR5Q9H1C0 372 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 KCNK15Q9H427 330 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 LAMP3Q9UQV4 416 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 LOC107986453A0A1B0GWG9 222 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF320A2RRD8 509 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 IFNL4K9M1U5 179 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 SIRPB1O00241 398 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 RHBDL1O75783 438 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 HLA-DRB1P01911 266 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 CD55P08174 381 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 CDKN1AP38936 164 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 SSBP2P81877 361 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-204ENST00000369530 MFGE8Q08431 387 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-204ENST00000369530 BATFQ16520 125 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 GLYATL3Q5SZD4 288 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 LIAT1Q6ZQX7 453 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 FBXL14Q8N1E6 418 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 OR5AU1Q8NGC0 362 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 OR2T10Q8NGZ9 312 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 RND1Q92730 232 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 OXGR1Q96P68 337 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 TAS2R4Q9NYW5 299 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 C1RLQ9NZP8 487 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 PPIAL4AQ9Y536 164 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 IGLV3-9A0A075B6K5 115 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 DPRXA6NFQ7 191 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 KBTBD11O94819 623 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 CDS2O95674 445 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 HRH1P35367 487 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 PRSS12P56730 875 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 MPV17LQ2QL34 196 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 TRAPPC6BQ86SZ2 158 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 SAXO1Q8IYX7 474 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 TCTEX1D1Q8N7M0 179 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 NICN1Q9BSH3 213 aa5.72□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM250H0YL14 139 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 MLNRO43193 412 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 MMP9P14780 707 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 GABRA2P47869 451 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 SLC25A47Q6Q0C1 308 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 WDR82Q6UXN9 313 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 AAED1Q7RTV5 226 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 CALHM1Q8IU99 346 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 OR5A2Q8NGI9 324 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 PRR7Q8TB68 274 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 OR51E1Q8TCB6 317 aa5.71□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF837Q96EG3 531 aaPredicted RBP5.71□□□□□ -1.49
CSDE1-204ENST00000369530 PEF1Q9UBV8 284 aaKnown RBP5.71□□□□□ -1.49
CSDE1-204ENST00000369530 HECTD1Q9ULT8 2610 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 IGLV1-36A0A0B4J1U3 117 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 CD5LO43866 347 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 LINC00869P0C866 280 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 PATE4P0C8F1 98 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 RHOBP62745 196 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF672Q499Z4 452 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 Q6ZN92 141 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM182Q6ZP80 229 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 POM121L2Q96KW2 1035 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 MANBALQ9NQG1 85 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 MRPS28Q9Y2Q9 187 aaKnown RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 TNFRSF18Q9Y5U5 241 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 LRRK2Q5S007 2527 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 PRH1P02810 166 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 WNT2P09544 360 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 ATP6V0CP27449 155 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 GCH1P30793 250 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 SUMO1P63165 101 aaKnown RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 SPATA46Q5T0L3 261 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 FGFBP3Q8TAT2 258 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 FNDC9Q8TBE3 224 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 BEX4Q9NWD9 120 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 PRSS50Q9UI38 385 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 AK3Q9UIJ7 227 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 TBL2Q9Y4P3 447 aaKnown RBP5.71□□□□□ -1.5
CSDE1-204ENST00000369530 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
CSDE1-204ENST00000369530 CRYM-AS1A6NIL9 109 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 LIPFP07098 398 aa5.7□□□□□ -1.5
CSDE1-204ENST00000369530 REG1BP48304 166 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms