RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 A0A1W2PN81 502 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 PDE6DO43924 150 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 PMCHP20382 165 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 PRRX1P54821 245 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 KRTDAPP60985 99 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 LYZP61626 148 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 ICAM4Q14773 271 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF146Q15072 292 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 BARX1Q9HBU1 254 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-206ENST00000368215 ZDHHC8Q9ULC8 765 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 MLNRO43193 412 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 SLC25A17O43808 307 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 REG1AP05451 166 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 LYL1P12980 280 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-206ENST00000368215 PCSK4Q6UW60 755 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 MRPL37Q9BZE1 423 aaKnown RBP7.08□□□□□ -1.28
PTPRK-206ENST00000368215 TMEM167BQ9NRX6 74 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 EML6Q6ZMW3 1958 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 HELTA6NFD8 242 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 RAB4AP20338 218 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 PEAR1Q5VY43 1037 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-206ENST00000368215 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
PTPRK-206ENST00000368215 SIGLECL1Q8N7X8 197 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 STARD4Q96DR4 205 aa7.08□□□□□ -1.28
PTPRK-206ENST00000368215 CAMPP49913 170 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 GNB2P62879 340 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 CA2P00918 260 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 RPL8P62917 257 aaKnown RBP7.07□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF383Q8NA42 475 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 P2RX4Q99571 388 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 CLN5O75503 358 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 FAM87AP0C7U9 286 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 CCL3L1P16619 93 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 GCSAMLQ5JQS6 135 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 LINC01560Q8TB33 94 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 GATAD1Q8WUU5 269 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 MPDU1O75352 247 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 TMEM50AO95807 157 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 OR9G9P0C7N8 305 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 IER3P46695 156 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
PTPRK-206ENST00000368215 BSPH1Q075Z2 132 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 S100A7AQ86SG5 101 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 WFIKKN1Q96NZ8 548 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 MS4A10Q96PG2 267 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 TIMM9Q9Y5J7 89 aa7.07□□□□□ -1.28
PTPRK-206ENST00000368215 K7EQM0 130 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 KBTBD11O94819 623 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 TRGC1P0CF51 173 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 GATA2P23769 480 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 RPEL1Q2QD12 228 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 MORN2Q502X0 79 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 OR4A47Q6IF82 309 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 TOMM20LQ6UXN7 152 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 Q8WTZ3 238 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 COQ2Q96H96 371 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 IL19Q9UHD0 177 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 YLPM1P49750 1951 aaKnown RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 FOXI3A8MTJ6 420 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CHEK1O14757 476 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 LINC00869P0C866 280 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CEACAM1P13688 526 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 WDR86Q86TI4 376 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CD177Q8N6Q3 437 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 STPG3Q8N7X2 389 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 SSC4DQ8WTU2 575 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 SEBOXQ9HB31 216 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 HILPDAQ9Y5L2 63 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CHD9Q3L8U1 2897 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 KBTBD11-OT1A0A1B0GTJ5 212 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF729A6NN14 1252 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 COLCA2A8K830 154 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 RRHO14718 337 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 GATCO43716 136 aaKnown RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ATP5G3P48201 142 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 MMDQ15546 238 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 C10orf113Q5VZT2 155 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 RPRMLQ8N4K4 120 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 OR1L4Q8NGR5 311 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 RAB1CQ92928 201 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 RAB1BQ9H0U4 201 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ASCL3Q9NQ33 180 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ZNF586Q9NXT0 402 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 CRISP2P16562 243 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ARL16Q0P5N6 197 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 SRSF7Q16629 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 Q56UQ5 140 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 ETFRF1Q6IPR1 90 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 PDPNQ86YL7 162 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 OR51G1Q8NGK1 321 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 SGK494Q96LW2 274 aa7.06□□□□□ -1.28
PTPRK-206ENST00000368215 FGF23Q9GZV9 251 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-206ENST00000368215 PLSCR4Q9NRQ2 329 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms