RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LINC00473A8K010 186 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 TGOLN2O43493 480 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 MRPS14O60783 128 aaKnown RBP10.5□□□□□ -0.73
VAMP4-202ENST00000367740 ZNF735P0CB33 412 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 LIMS3P0CW19 117 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 LIMS4P0CW20 117 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 HIST1H1BP16401 226 aaKnown RBP10.5□□□□□ -0.73
VAMP4-202ENST00000367740 RPS11P62280 158 aaKnown RBP eCLIP10.5□□□□□ -0.73
VAMP4-202ENST00000367740 RPS27AP62979 156 aaKnown RBP10.5□□□□□ -0.73
VAMP4-202ENST00000367740 Q499Y3 187 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 SSX9Q7RTT3 188 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 SMIM19Q96E16 107 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 RNF2Q99496 336 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 Q9N2K0 584 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 AK3Q9UIJ7 227 aa10.5□□□□□ -0.73
VAMP4-202ENST00000367740 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 TRBV5-7A0A0A0MS05 114 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 A0A1W2PPK0 400 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 ZNF207O43670 478 aaKnown RBP10.49□□□□□ -0.73
VAMP4-202ENST00000367740 DHFRP00374 187 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 REG1AP05451 166 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
VAMP4-202ENST00000367740 RPL27AP46776 148 aaKnown RBP10.49□□□□□ -0.73
VAMP4-202ENST00000367740 CMC4P56277 68 aaPredicted RBP10.49□□□□□ -0.73
VAMP4-202ENST00000367740 TPBGQ13641 420 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 IRF3Q14653 427 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 RNF212Q495C1 297 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 OR2G6Q5TZ20 316 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 OR52I1Q8NGK6 324 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 C18orf15Q96N68 181 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 RIMS4Q9H426 269 aaPredicted RBP10.49□□□□□ -0.73
VAMP4-202ENST00000367740 GHRLQ9UBU3 117 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 MGAT4AQ9UM21 535 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 ARL2BPQ9Y2Y0 163 aa10.49□□□□□ -0.73
VAMP4-202ENST00000367740 A0A0A6YYD4 124 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 SNTNA6NMZ2 147 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 CD3GP09693 182 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 UQCC2Q9BRT2 126 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 TM2D1Q9BX74 207 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 TMEM59Q9BXS4 323 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 KCNK15Q9H427 330 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 AMBNQ9NP70 447 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 PLEKHJ1Q9NW61 149 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 HMCN2Q8NDA2 5059 aa10.48□□□□□ -0.73
VAMP4-202ENST00000367740 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 OGG1O15527 345 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 GABRB1P18505 474 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 SRMP19623 302 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 C4BPBP20851 252 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 CALB2P22676 271 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 UNC119Q13432 240 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 AMIGO2Q86SJ2 522 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 VKORC1L1Q8N0U8 176 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 OR6M1Q8NGM8 313 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 ADTRPQ96IZ2 230 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 OR2A7Q96R45 310 aa10.47□□□□□ -0.73
VAMP4-202ENST00000367740 OR2T8A6NH00 312 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.46□□□□□ -0.73
VAMP4-202ENST00000367740 NDUFA4O00483 81 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 KBTBD11O94819 623 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 LALBAP00709 142 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 DEFA4P12838 97 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 YIF1BQ5BJH7 314 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 LIPKQ5VXJ0 399 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 LINC00528Q8N1L1 170 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 NKAIN3Q8N8D7 197 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 GGHQ92820 318 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 PGLYRP3Q96LB9 341 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 OR51E2Q9H255 320 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 C12orf4Q9NQ89 552 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 ARGLU1Q9NWB6 273 aaPredicted RBP10.46□□□□□ -0.73
VAMP4-202ENST00000367740 SMPXQ9UHP9 88 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 POMPQ9Y244 141 aa10.46□□□□□ -0.73
VAMP4-202ENST00000367740 CGB1A6NKQ9 187 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 TRDCB7Z8K6 153 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 K7EMT4 169 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 CHEK1O14757 476 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 UBBP0CG47 229 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 PTBP1P26599 531 aaKnown RBP eCLIP10.45□□□□□ -0.74
VAMP4-202ENST00000367740 SERPINB10P48595 397 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 PSMD7P51665 324 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
VAMP4-202ENST00000367740 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 SLC29A1Q99808 456 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 OAZ3Q9UMX2 235 aa10.45□□□□□ -0.74
VAMP4-202ENST00000367740 BET1O15155 118 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 SOCS1O15524 211 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 ETV1P50549 477 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 DEFB131AP59861 70 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 ARFRP1Q13795 201 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 Q5VSD8 79 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 OR4A4PQ8NGN8 299 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms