RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 LMO7DNF2Z398 122 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 ZP1P60852 638 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 SPCS1Q9Y6A9 102 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE12BA1L429 117 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 LIFP15018 202 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 FOXL2P58012 376 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF774Q6NX45 483 aa3.21□□□□□ -1.89
SYNE1-207ENST00000367255 C20orf78Q9BR46 151 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 DUSP15Q9H1R2 295 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 COL8A2P25067 703 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ZIC1Q15915 447 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM219Q86XT9 240 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SHISA5Q8N114 240 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 LINC00052Q96N35 136 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 RFNGQ9Y644 331 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 KLF5Q13887 457 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SPINK9Q5DT21 86 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 WDR82Q6UXN9 313 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MASP2O00187 686 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MGST3O14880 152 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 CCL25O15444 150 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ANKRD39Q53RE8 183 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 B9D1Q9UPM9 204 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 WDR81Q562E7 1941 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 CFHR2P36980 270 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 CX3CL1P78423 397 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 HBDP02042 147 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 DEFB125Q8N687 156 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 H1FXQ92522 213 aaKnown RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 AAED1Q7RTV5 226 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 RTBDNQ9BSG5 229 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 PRDM6Q9NQX0 595 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 HYPMO75409 117 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TOMM40O96008 361 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 AMN1Q8IY45 258 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 KLK11Q9UBX7 282 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 RPL36A-HNRNPH2H7BZ11 118 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM177Q53S58 311 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF740Q8NDX6 193 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 OR10AD1Q8NGE0 317 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SDF2L1Q9HCN8 221 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MUC21A0A0G2JKD1 596 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MUC21A0A140T8X8 626 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 M0R3E3 92 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MFAP2P55001 183 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MUC21Q5SSG8 566 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 OR1B1Q8NGR6 318 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 WNT16Q9UBV4 365 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 PPIAL4AQ9Y536 164 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM272A0A1B0GTI8 110 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 J3QRE1 110 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SRSF10O75494 262 aaKnown RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SLC25A53Q5H9E4 307 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TBC1D26Q86UD7 250 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MENTQ9BUN1 341 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 AICDAQ9GZX7 198 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 PRSS38A1L453 326 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 GAGE13Q4V321 117 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 SGK494Q96LW2 274 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 COL22A1Q8NFW1 1626 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MON2Q7Z3U7 1717 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 FAM157BP0CG42 384 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 KLRD1Q13241 179 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 FAM222AQ5U5X8 452 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 LCN15Q6UWW0 184 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 TBX15Q96SF7 602 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF638Q14966 1978 aaKnown RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MYO9AB2RTY4 2548 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 ICOSLGO75144 302 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 MNX1P50219 401 aaPredicted RBP3.21□□□□□ -1.9
SYNE1-207ENST00000367255 CTHRC1Q96CG8 243 aa3.21□□□□□ -1.9
SYNE1-207ENST00000367255 FOLR3P41439 243 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 BCORP1Q8N888 145 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 KLK2P20151 261 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ACP1P24666 158 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SRIP30626 198 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 OR3A4PP47883 348 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RBM11P57052 281 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PLPPR2Q96GM1 343 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 IGHV1-69DA0A0B4J2H0 117 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ASPDHA6ND91 283 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 FCER1GP30273 86 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PROCRQ9UNN8 238 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 K7EP34 96 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 FUT5Q11128 374 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ATRAIDQ6UW56 229 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM86BQ8N661 226 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF883P0CG24 379 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 CXCL5P42830 114 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM50BP56557 158 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ID3Q02535 119 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF714Q96N38 554 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 MLNRO43193 412 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 VGLL4Q14135 290 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms