RNA–Protein interactions for RNA: ENST00000366741.5

MRPL55-214, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-214ENST00000366741 MIXL1Q9H2W2 232 aa11.37□□□□□ -0.59
MRPL55-214ENST00000366741 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
MRPL55-214ENST00000366741 MEGF8Q7Z7M0 2845 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 MSGN1A6NI15 193 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 ZNF701M0R085 212 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-214ENST00000366741 CTDSP2O14595 271 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 CTDSPLO15194 276 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-214ENST00000366741 TRGV3P03979 118 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 OR9G9P0C7N8 305 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 F2RP25116 425 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 TAS2R19P59542 299 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 LAX1Q8IWV1 398 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 OR1N2Q8NGR9 330 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 OR52I2Q8NH67 350 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 ABHD1Q96SE0 405 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 TINAGL1Q9GZM7 467 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-214ENST00000366741 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
MRPL55-214ENST00000366741 KLK11Q9UBX7 282 aa11.36□□□□□ -0.59
MRPL55-214ENST00000366741 MPPED1O15442 326 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 RAMP3O60896 148 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 INSL3P51460 131 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 ERVK-16P61578 105 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 RPL8P62917 257 aaKnown RBP11.35□□□□□ -0.59
MRPL55-214ENST00000366741 EGFEM1PQ0D2K5 195 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 C9orf66Q5T8R8 295 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 ASPHD1Q5U4P2 390 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 FOXB2Q5VYV0 432 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 OR51H1Q8NH63 302 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 SMIM4Q8WVI0 70 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 ZNF486Q96H40 463 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-214ENST00000366741 DIRAS2Q96HU8 199 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
MRPL55-214ENST00000366741 RSRP1Q9BUV0 290 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
MRPL55-214ENST00000366741 ZNF355PQ9NSJ1 428 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 CEPT1Q9Y6K0 416 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 NOTCH3Q9UM47 2321 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 CMYA5Q8N3K9 4069 aa11.35□□□□□ -0.59
MRPL55-214ENST00000366741 C13orf42A0A1B0GVH6 325 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 FAM223BA6NKX1 122 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 LINC01619G3V211 115 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 CD74P04233 296 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 RLN1P04808 185 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 ECI1P42126 302 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 RAB25P57735 213 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 FAM223AQ8IWN6 122 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 ADAD2Q8NCV1 583 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 DGCR14Q96DF8 476 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 C6orf62Q9GZU0 229 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
MRPL55-214ENST00000366741 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
MRPL55-214ENST00000366741 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 DHFRP00374 187 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-214ENST00000366741 ZNF735P0CB33 412 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 HLA-GP17693 338 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 PTBP1P26599 531 aaKnown RBP eCLIP11.33□□□□□ -0.6
MRPL55-214ENST00000366741 RND3P61587 244 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 IL18Q14116 193 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 MEF2DQ14814 521 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 OR4A47Q6IF82 309 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 HSD17B13Q7Z5P4 300 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-214ENST00000366741 LHFPL1Q86WI0 220 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 RANGRFQ9HD47 186 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-214ENST00000366741 HRASLSQ9HDD0 168 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 COA4Q9NYJ1 87 aa11.33□□□□□ -0.6
MRPL55-214ENST00000366741 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 S1PR2O95136 353 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 CD3DP04234 171 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 ZP3P21754 424 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 DCTN2Q13561 401 aaKnown RBP11.32□□□□□ -0.6
MRPL55-214ENST00000366741 STEAP1BQ6NZ63 245 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 OR5B12Q96R08 314 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
MRPL55-214ENST00000366741 SLC2A9Q9NRM0 540 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
MRPL55-214ENST00000366741 TRBV9A0A0B4J1U6 114 aa11.31□□□□□ -0.6
MRPL55-214ENST00000366741 DPPA5A6NC42 116 aa11.31□□□□□ -0.6
MRPL55-214ENST00000366741 TEX22C9J3V5 150 aa11.31□□□□□ -0.6
MRPL55-214ENST00000366741 M0QYG6 137 aa11.31□□□□□ -0.6
MRPL55-214ENST00000366741 UPK2O00526 184 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms