RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ZNF2Q9BSG1 426 aaPredicted RBP9.69□□□□□ -0.86
MRPL55-209ENST00000366735 MED28Q9H204 178 aa9.69□□□□□ -0.86
MRPL55-209ENST00000366735 TRAPPC2LQ9UL33 140 aa9.69□□□□□ -0.86
MRPL55-209ENST00000366735 TRBV6-7A0A0A0MS04 114 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 IGHV3-43A0A0B4J1X8 118 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 LINC01548A6NM66 108 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 CCNKO75909 580 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 CTSDP07339 412 aaPredicted RBP9.68□□□□□ -0.86
MRPL55-209ENST00000366735 OR4E1P0C645 316 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 SULT1A3P0DMM9 295 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 SULT1A4P0DMN0 295 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 IGHV3-43DP0DP04 118 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 FCGR2CP31995 323 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 DHODHQ02127 395 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 CFHR3Q02985 330 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF616Q08AN1 781 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 CBX3Q13185 183 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 MMDQ15546 238 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF429Q86V71 674 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ZFAND1Q8TCF1 268 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF431Q8TF32 576 aaPredicted RBP9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ST6GALNAC6Q969X2 333 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 HSPB9Q9BQS6 159 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 SEC22CQ9BRL7 303 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 RTBDNQ9BSG5 229 aaPredicted RBP9.68□□□□□ -0.86
MRPL55-209ENST00000366735 C5orf66Q9H5L9 145 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 KCNIP1Q9NZI2 227 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
MRPL55-209ENST00000366735 ZBTB25P24278 435 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 RUNX1Q01196 453 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 FCN2Q15485 313 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 TMEM128Q5BJH2 165 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 TMED4Q7Z7H5 227 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 LYG2Q86SG7 212 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 PRR18Q8N4B5 295 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 ASCL2Q99929 193 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 FXYD6Q9H0Q3 95 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 ZMAT4Q9H898 229 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 KIAA1456Q9P272 454 aa9.67□□□□□ -0.86
MRPL55-209ENST00000366735 C12orf77C9JDV5 145 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 SSNA1O43805 119 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 RGS11O94810 467 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 PPYP01298 95 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 HNRNPCP07910 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
MRPL55-209ENST00000366735 AADACP22760 399 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 HERV-K104P61576 105 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 DHRS2Q13268 280 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 LPCAT3Q6P1A2 487 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 H1FOOQ8IZA3 346 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-209ENST00000366735 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 TCTE3Q8IZS6 198 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 ADAD2Q8NCV1 583 aaKnown RBP9.66□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 OR11H7Q8NGC8 314 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 OR10V1Q8NGI7 309 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 OR10J5Q8NHC4 309 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 MUC7Q8TAX7 377 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 UBALD1Q8TB05 177 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF486Q96H40 463 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-209ENST00000366735 ZNF251Q9BRH9 671 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 PLSCR3Q9NRY6 295 aa9.66□□□□□ -0.86
MRPL55-209ENST00000366735 C14orf166Q9Y224 244 aaKnown RBP9.66□□□□□ -0.86
MRPL55-209ENST00000366735 A0A0B4J2A0 478 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 C9orf170A2RU37 121 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 OVOL1O14753 267 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 BET1O15155 118 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 HLA-DRB1P01911 266 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 HBZP02008 142 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 PGAM2P15259 253 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 F2RL1P55085 397 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 CD300CQ08708 224 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 PPP1R1AQ13522 171 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 C12orf45Q8N5I9 185 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-209ENST00000366735 OR52B4Q8NGK2 314 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 TMEM230Q96A57 120 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 RCHY1Q96PM5 261 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 OR2S2Q9NQN1 319 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 PARP11Q9NR21 331 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 SHPKQ9UHJ6 478 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 OR2W1Q9Y3N9 320 aa9.65□□□□□ -0.86
MRPL55-209ENST00000366735 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 I3L521 148 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 ATP6V0E1O15342 81 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 SLC31A2O15432 143 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 NBR2O15453 112 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 SAP30O75446 220 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 SFT2D2O95562 160 aa9.64□□□□□ -0.87
MRPL55-209ENST00000366735 HLA-AP01891 365 aaKnown RBP9.64□□□□□ -0.87
MRPL55-209ENST00000366735 AKR1C4P17516 323 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms