RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NRN1Q9NPD7 142 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
TRIM58-201ENST00000366481 ANKRD30BLA7E2S9 258 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 C9orf172C9J069 976 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 MLNRO43193 412 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 S100A7P31151 101 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 ATP6V1FQ16864 119 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 FAM58AQ8N1B3 248 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 DRAM1Q8N682 238 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.45■□□□□ 0.22
TRIM58-201ENST00000366481 SERTAD4Q9NUC0 356 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 DLL3Q9NYJ7 618 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 GRPP07492 148 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 CEACAM8P31997 349 aaPredicted RBP16.44■□□□□ 0.22
TRIM58-201ENST00000366481 BORCS7Q96B45 105 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 MUC6Q6W4X9 2439 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 LOC102724200A0A096LPH7 203 aaPredicted RBP16.44■□□□□ 0.22
TRIM58-201ENST00000366481 LRP5LA4QPB2 252 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A10PA6NDY2 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A18PA6NE21 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A16PA6NEW6 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A20PA6NIJ5 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A8PA6NJQ4 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A7PA6NKC0 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A22PA8MWA6 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A12PA8MX19 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A5PA8MXJ8 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A23PA8MXZ1 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A15PP0C7V4 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A13PP0C7W8 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A14PP0C7W9 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 FAM90A24PP0C7X0 464 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 ARL14EPLP0DKL9 152 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 Q6ZS49 121 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 POM121L2Q96KW2 1035 aa16.44■□□□□ 0.22
TRIM58-201ENST00000366481 CDIPTO14735 213 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 CD99P14209 185 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 H2BFWTQ7Z2G1 175 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 GNB4Q9HAV0 340 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 RAC2P15153 192 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 TIMP3P35625 211 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 ALKBH7Q9BT30 221 aaPredicted RBP16.43■□□□□ 0.22
TRIM58-201ENST00000366481 RNF114Q9Y508 228 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 TRBV20OR9-2A0A075B6H5 130 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 YPEL1O60688 119 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 CYC1P08574 325 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 TDGF1P13385 188 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 MDP1Q86V88 176 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 TPRX1Q8N7U7 411 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 YPEL2Q96QA6 119 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 FAM173AQ9BQD7 235 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 OR2D2Q9H210 308 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 FZR1Q9UM11 496 aa16.43■□□□□ 0.22
TRIM58-201ENST00000366481 ODAMA1E959 279 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 RNPS1Q15287 305 aaKnown RBP16.42■□□□□ 0.22
TRIM58-201ENST00000366481 ZNF738Q8NE65 137 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 UHRF2Q96PU4 802 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 KCNIP2Q9NS61 270 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 BET1LQ9NYM9 111 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 WISP2O76076 250 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 C1orf174Q8IYL3 243 aa16.42■□□□□ 0.22
TRIM58-201ENST00000366481 HYPMO75409 117 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 LINC00310P59036 64 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 MRPL54Q6P161 138 aaKnown RBP16.41■□□□□ 0.22
TRIM58-201ENST00000366481 SSMEM1Q8WWF3 244 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 RNF212BA8MTL3 300 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 YPEL3P61236 119 aaPredicted RBP16.41■□□□□ 0.22
TRIM58-201ENST00000366481 RPEL1Q2QD12 228 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 ZNF826PQ6ZT77 177 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 MMD2Q8IY49 270 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 PARD6GQ9BYG4 376 aaPredicted RBP16.41■□□□□ 0.22
TRIM58-201ENST00000366481 S1PR2O95136 353 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 GPX1P07203 203 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 KLF3P57682 345 aaPredicted RBP16.41■□□□□ 0.22
TRIM58-201ENST00000366481 LTC4SQ16873 150 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 KLHDC1Q8N7A1 406 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 GAL3ST2Q9H3Q3 398 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 B4GALT7Q9UBV7 327 aa16.41■□□□□ 0.22
TRIM58-201ENST00000366481 DPRXA6NFQ7 191 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 LRRC30A6NM36 301 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 NDUFB8O95169 186 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 RBX1P62877 108 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 RPL31P62899 125 aaKnown RBP16.4■□□□□ 0.22
TRIM58-201ENST00000366481 RPL19P84098 196 aaKnown RBP16.4■□□□□ 0.22
TRIM58-201ENST00000366481 LCN12Q6JVE5 192 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 FAM234AQ9H0X4 552 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 GCM1Q9NP62 436 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 IL36BQ9NZH7 164 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 APC2O95996 2303 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 TMEM265A0A087WTH1 108 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 SELENOTP62341 195 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 FXYD3Q14802 87 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 WDR86Q86TI4 376 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 ST6GALNAC3Q8NDV1 305 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 SLC45A2Q9UMX9 530 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 LYZL6O75951 148 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 IGHV3-13P01766 116 aa16.4■□□□□ 0.22
TRIM58-201ENST00000366481 IGHV3-7P01780 117 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms