RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZNF295-AS1Q8N0V1 137 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 Q8WTZ3 238 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 NDUFB3O43676 98 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 FCN3O75636 299 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 IGLV2-14P01704 120 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 NDUFB7P17568 137 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 CEACAM6P40199 344 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 TMEM41BQ5BJD5 291 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 OR1L1Q8NH94 360 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 UBALD1Q8TB05 177 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 RSG1Q9BU20 258 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
SQSTM1-201ENST00000360718 TRGV10A0A0A0MS01 117 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 A1L4Q6 167 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 ZFP92A6NM28 416 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 S100A2P29034 98 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 NDUFA6P56556 154 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 MSMO1Q15800 293 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 IZUMO4Q1ZYL8 232 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF585BQ52M93 769 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 LCN15Q6UWW0 184 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 TIMD4Q96H15 378 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 DCTN5Q9BTE1 182 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 WDR61Q9GZS3 305 aaKnown RBP10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 CLDN34H7C241 214 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 PPIHO43447 177 aaKnown RBP10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 FSTL3O95633 263 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 SSTR5P35346 364 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 PMS2P11Q13670 270 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 ATP6V1FQ16864 119 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 SPANXN5Q5MJ07 72 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 TIMM9Q9Y5J7 89 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 FBN2P35556 2912 aa10.84□□□□□ -0.67
SQSTM1-201ENST00000360718 CYB5BO43169 146 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 NDUFS7O75251 213 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CXCL1P09341 107 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CDKN1AP38936 164 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CR1LQ2VPA4 569 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 FAM90A2PQ658T7 463 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF343Q6P1L6 599 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 DRAM1Q8N682 238 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 RAB1CQ92928 201 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 DOK5Q9P104 306 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 DMRT1Q9Y5R6 373 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 URGCP-MRPS24S4R325 110 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CENPEQ02224 2701 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 hADV38S2A0JD32 116 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 SEC14L6B5MCN3 397 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 TNFRSF13BO14836 293 aaPredicted RBP10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 HTD2P86397 168 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 ARL16Q0P5N6 197 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 LYPD2Q6UXB3 125 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 RFESDQ8TAC1 157 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 RCC1LQ96I51 464 aaKnown RBP10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 SLC39A9Q9NUM3 307 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 GAR1Q9NY12 217 aaKnown RBP10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 CELSR2Q9HCU4 2923 aa10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 HELZ2Q9BYK8 2649 aaKnown RBP10.83□□□□□ -0.68
SQSTM1-201ENST00000360718 SPG11Q96JI7 2443 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 ERVFRD-1P60508 538 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 SLC38A11Q08AI6 406 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 FAM53AQ6NSI3 398 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 OR4C12Q96R67 309 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 ELOA3CA0A087WX78 387 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 TGIF2-C20orf24A0A0A6YYL0 155 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 C15orf65H3BRN8 121 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 RND2P52198 227 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 CATR1Q13166 79 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 HAPLN4Q86UW8 402 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 OR52L2PQ8NGH6 319 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 FAM210BQ96KR6 192 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 VSIRQ9H7M9 311 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 CHODLQ9H9P2 273 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 CALYQ9NYX4 217 aa10.82□□□□□ -0.68
SQSTM1-201ENST00000360718 CEBPZOSA8MTT3 80 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 DVL1O14640 695 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 YIF1AO95070 293 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 MBP02144 154 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 OPN1MWP04001 364 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 OPN1MW2P0DN77 364 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 OPN1MW3P0DN78 364 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 COX6B1P14854 86 aa10.81□□□□□ -0.68
SQSTM1-201ENST00000360718 RPL31P62899 125 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms