RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 FAM90A8PA6NJQ4 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A7PA6NKC0 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A22PA8MWA6 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A12PA8MX19 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A5PA8MXJ8 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A23PA8MXZ1 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 TNFSF12O43508 249 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 VENTXO95231 258 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 OR2H2O95918 312 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A15PP0C7V4 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A13PP0C7W8 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A14PP0C7W9 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 FAM90A24PP0C7X0 464 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 GCH1P30793 250 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 GNG10P50151 68 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 ZNF718Q3SXZ3 478 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 WFDC8Q8IUA0 241 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 COL12A1Q99715 3063 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 PLK3Q9H4B4 646 aa15.48■□□□□ 0.07
SNX11-201ENST00000359238 PKDREJQ9NTG1 2253 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 CCL21O00585 134 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 MBNL2Q5VZF2 373 aaKnown RBP15.47■□□□□ 0.07
SNX11-201ENST00000359238 TMEM106BQ9NUM4 274 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 ZFP30Q9Y2G7 519 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 TRAPPC1Q9Y5R8 145 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 PXMP4Q9Y6I8 212 aa15.47■□□□□ 0.07
SNX11-201ENST00000359238 IL3RAP26951 378 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 OR5I1Q13606 314 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 SRSF7Q16629 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNX11-201ENST00000359238 GPR146Q96CH1 333 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 METRNQ9UJH8 293 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 SIAH2O43255 324 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 NUPR1O60356 82 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 PSPNO60542 156 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 NXPH2O95156 264 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 THBDP07204 575 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 ARL16Q0P5N6 197 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 COL5A1-AS1Q5SY13 56 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 TOMM20LQ6UXN7 152 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 WDR82Q6UXN9 313 aa15.46■□□□□ 0.07
SNX11-201ENST00000359238 WDR61Q9GZS3 305 aaKnown RBP15.46■□□□□ 0.07
SNX11-201ENST00000359238 A0A0G2JRQ6 117 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 HBG1P69891 147 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 HBG2P69892 147 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 OR2Z1Q8NG97 314 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 DIDO1Q9BTC0 2240 aaKnown RBP15.45■□□□□ 0.06
SNX11-201ENST00000359238 IGKV1D-13A0A0B4J2D9 117 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 DEGS1O15121 323 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 TUSC2O75896 110 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 IGKV1-13P0DP09 117 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 TMEM183BQ1AE95 376 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 TPTE2P1Q5T6R2 138 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 FAM53AQ6NSI3 398 aaPredicted RBP15.45■□□□□ 0.06
SNX11-201ENST00000359238 RIMS4Q9H426 269 aaPredicted RBP15.45■□□□□ 0.06
SNX11-201ENST00000359238 CCL28Q9NRJ3 127 aa15.45■□□□□ 0.06
SNX11-201ENST00000359238 HRNRQ86YZ3 2850 aaPredicted RBP15.44■□□□□ 0.06
SNX11-201ENST00000359238 TMEM8BA6NDV4 472 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 FAM90A27PA6NNH2 459 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 EGR1P18146 543 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 CD40P25942 277 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 PAFAH1B2P68402 229 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 CST9LP1Q5W188 147 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 TMEM144Q7Z5S9 345 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 HAPLN4Q86UW8 402 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 RPP25LQ8N5L8 163 aaKnown RBP15.44■□□□□ 0.06
SNX11-201ENST00000359238 CMTM2Q8TAZ6 248 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 MANBALQ9NQG1 85 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 TCF21O43680 179 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 PGLYRP1O75594 196 aaPredicted RBP15.44■□□□□ 0.06
SNX11-201ENST00000359238 CD99P14209 185 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 HES4Q9HCC6 221 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 AURKAIP1Q9NWT8 199 aaPredicted RBP15.44■□□□□ 0.06
SNX11-201ENST00000359238 PSENENQ9NZ42 101 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 TIMM9Q9Y5J7 89 aa15.44■□□□□ 0.06
SNX11-201ENST00000359238 DSCAMO60469 2012 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 A0A1B0GUS0 222 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 SYNGR2O43760 224 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 TESK1Q15569 626 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 TDRG1Q3Y452 100 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 FAM78BQ5VT40 261 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 OR4F5Q8NH21 305 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 OR4F4Q96R69 305 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 CXXC4Q9H2H0 198 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 A0A0U1RQK1 487 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 ZNF320A2RRD8 509 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 IGKV1D-33P01593 117 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 IGKV1-33P01594 117 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 F2RP25116 425 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 TPPP2P59282 170 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 COTL1Q14019 142 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 CDSNQ15517 529 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 C3orf36Q3SXR2 165 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 SAPCD1Q5SSQ6 148 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 Q6ZWC4 215 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 TAF15Q92804 592 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNX11-201ENST00000359238 OR4C12Q96R67 309 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 DNAJC4Q9NNZ3 241 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 POLDIP2Q9Y2S7 368 aa15.43■□□□□ 0.06
SNX11-201ENST00000359238 YLPM1P49750 1951 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms