RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 RSG1Q9BU20 258 aa18.61■□□□□ 0.57
POLR2J2-202ENST00000358438 SMG1Q96Q15 3661 aaKnown RBP18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 TRBV6-6A0A0A6YYG2 114 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 HAND1O96004 215 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 PSMB3P49720 205 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 FGF8P55075 233 aaPredicted RBP18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 HOXA4Q00056 320 aaPredicted RBP18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 TEX43Q6ZNM6 134 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 OR2V2Q96R30 315 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 TBX15Q96SF7 602 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 MANBALQ9NQG1 85 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 ATP23Q9Y6H3 246 aa18.6■□□□□ 0.57
POLR2J2-202ENST00000358438 KIR2DS1A0A191URI9 304 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 KIR2DS4P43632 304 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 PAFAH1B2P68402 229 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 HBG1P69891 147 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 HBG2P69892 147 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 KIR2DS1Q14954 304 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 VSIRQ9H7M9 311 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 NGBQ9NPG2 151 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 SPRY3O43610 288 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 IL6RP08887 468 aaPredicted RBP18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 WNT2P09544 360 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 IRF2P14316 349 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 RPL15P61313 204 aaKnown RBP18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 SSX7Q7RTT5 188 aa18.59■□□□□ 0.57
POLR2J2-202ENST00000358438 ZNF705FA8MVS1 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 SCTP09683 121 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 ZNF705DP0CH99 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 ZNF705BP0CI00 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 CEBPDP49716 269 aaPredicted RBP18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 SMIM21Q3B7S5 101 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 FBXL19-AS1Q494R0 122 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 ZNF818PQ6ZRF7 136 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 LRRC29Q8WV35 223 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 LHX4Q969G2 390 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 ELOVL1Q9BW60 279 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 PARLQ9H300 379 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 SLC39A9Q9NUM3 307 aa18.58■□□□□ 0.57
POLR2J2-202ENST00000358438 FAM90A27PA6NNH2 459 aa18.58■□□□□ 0.56
POLR2J2-202ENST00000358438 TUSC2O75896 110 aa18.58■□□□□ 0.56
POLR2J2-202ENST00000358438 CTXN2P0C2S0 81 aa18.58■□□□□ 0.56
POLR2J2-202ENST00000358438 ZNF295-AS1Q8N0V1 137 aa18.58■□□□□ 0.56
POLR2J2-202ENST00000358438 YLPM1P49750 1951 aaKnown RBP18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 NBASA2RRP1 2371 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 KIAA1324LA8MWY0 1029 aaPredicted RBP18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 YPEL1O60688 119 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 S100GP29377 79 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 TMEM183BQ1AE95 376 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 SPRNQ5BIV9 151 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 ZNF497Q6ZNH5 498 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 GAPTQ8N292 157 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 DTD1Q8TEA8 209 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 YPEL2Q96QA6 119 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 ZFP30Q9Y2G7 519 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 PXMP4Q9Y6I8 212 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 RELNP78509 3460 aa18.57■□□□□ 0.56
POLR2J2-202ENST00000358438 GYPAP02724 150 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 CFHR2P36980 270 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 ADORA2A-AS1P86434 159 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 TMEM267Q0VDI3 215 aaPredicted RBP18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 COL5A1-AS1Q5SY13 56 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 WDR61Q9GZS3 305 aaKnown RBP18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 TMEM106BQ9NUM4 274 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 ICE1Q9Y2F5 2266 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 A6NNC1 897 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 PSPNO60542 156 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 ADIPOQQ15848 244 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 RPUSD4Q96CM3 377 aaKnown RBP18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 TRAPPC1Q9Y5R8 145 aa18.56■□□□□ 0.56
POLR2J2-202ENST00000358438 COL6A6A6NMZ7 2263 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 SRRM5B3KS81 715 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 IGHV1-46P01743 117 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 ESDP10768 282 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 TMEM144Q7Z5S9 345 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 PRR7Q8TB68 274 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 ITLN1Q8WWA0 313 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 RNASE6Q93091 150 aaKnown RBP18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 DIRC2Q96SL1 478 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 KALRNO60229 2985 aa18.55■□□□□ 0.56
POLR2J2-202ENST00000358438 GATA4P43694 442 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 MOGAT3Q86VF5 341 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 LSM10Q969L4 123 aaKnown RBP18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 IGKV1-6A0A0C4DH72 117 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 IL3RAP26951 378 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 TPPP2P59282 170 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 MOB1BQ7L9L4 216 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 GPR146Q96CH1 333 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 IL19Q9UHD0 177 aa18.54■□□□□ 0.56
POLR2J2-202ENST00000358438 CTXND1A0A1B0GTU2 59 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 IFNL4K9M1U5 179 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 EGR1P18146 543 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 TNFAIP6P98066 277 aaPredicted RBP18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 FOXL1Q12952 345 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 DMRTA1Q5VZB9 504 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 GCSAMQ8N6F7 178 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 SYNGR2O43760 224 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 SAPCD1Q5SSQ6 148 aa18.53■□□□□ 0.56
POLR2J2-202ENST00000358438 CMTM2Q8TAZ6 248 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms