RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NPIPB4C9JG80 1138 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 FHITP49789 147 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 OR11H4Q8NGC9 324 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 RHOVQ96L33 236 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 ZNF430Q9H8G1 570 aaPredicted RBP8.37□□□□□ -1.07
CHD3-202ENST00000358181 PPYP01298 95 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 CBLN3Q6UW01 205 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 NUBPLQ8TB37 319 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 OR51M1Q9H341 326 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 TRAV8-4A0A0B4J246 113 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 CTAG2O75638 210 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 MESP2Q0VG99 397 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 LINC00305Q7Z4B0 112 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 SYS1Q8N2H4 156 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 LNP1A1A4G5 178 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 GGCTO75223 188 aaKnown RBP8.37□□□□□ -1.07
CHD3-202ENST00000358181 PEX11BO96011 259 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 P2RY1P47900 373 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 TMEM155Q4W5P6 130 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 ZNF645Q8N7E2 425 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 PRSS22Q9GZN4 317 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 VCX2Q9H322 139 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 PIKFYVEQ9Y2I7 2098 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 J3QT63 122 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 GHRHP01286 108 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 THAP8Q8NA92 274 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 CHD5Q8TDI0 1954 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
CHD3-202ENST00000358181 TRBV5-4A0A0C4DH59 114 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 OR2H2O95918 312 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 LINC00614P0C842 121 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 RPL36A-HNRNPH2H7BZ11 118 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
CHD3-202ENST00000358181 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 LEPP41159 167 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 FBXL15Q9H469 300 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 NPVFQ9HCQ7 196 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 C21orf62Q9NYP8 219 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 TRAV25A0A0B4J276 109 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 SPINT1O43278 529 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 EVI2AP22794 236 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 ISXQ2M1V0 245 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 MMD2Q8IY49 270 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
CHD3-202ENST00000358181 A0A0G2JLM5 398 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 MPC2O95563 127 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 RPL34P49207 117 aaKnown RBP8.36□□□□□ -1.07
CHD3-202ENST00000358181 RAG2P55895 527 aa8.36□□□□□ -1.07
CHD3-202ENST00000358181 ELF5Q9UKW6 265 aaPredicted RBP8.36□□□□□ -1.07
CHD3-202ENST00000358181 IGKV1D-42A0A075B6H8 117 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 IL6RP08887 468 aaPredicted RBP8.35□□□□□ -1.07
CHD3-202ENST00000358181 COL22A1Q8NFW1 1626 aaPredicted RBP8.35□□□□□ -1.07
CHD3-202ENST00000358181 WNT2BQ93097 391 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 ST6GAL2Q96JF0 529 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 RCC1P18754 421 aaPredicted RBP8.35□□□□□ -1.07
CHD3-202ENST00000358181 RPRMQ9NS64 109 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 H3BQ15 152 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 NDUFS8O00217 210 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 GALP22466 123 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 TMEM256Q8N2U0 113 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 OR11H2Q8NH07 326 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 NRIP2Q9BQI9 281 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
CHD3-202ENST00000358181 TCF23Q7RTU1 214 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 WDFY2Q96P53 400 aa8.35□□□□□ -1.07
CHD3-202ENST00000358181 TRAF4Q9BUZ4 470 aaPredicted RBP8.35□□□□□ -1.07
CHD3-202ENST00000358181 CRYBB3P26998 211 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 BHLHA9Q7RTU4 235 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
CHD3-202ENST00000358181 ZXDCQ2QGD7 858 aaPredicted RBP8.34□□□□□ -1.07
CHD3-202ENST00000358181 PLXNB2O15031 1838 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 NDUFB6O95139 128 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 MPV17P39210 176 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 EVX1P49640 407 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 RUNX1Q01196 453 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 LINC00299Q6ZSB3 139 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 RNF182Q8N6D2 247 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
CHD3-202ENST00000358181 BCORQ6W2J9 1755 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 A0A0B4J2E0 115 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 A0A1B0GX12 115 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 PRR33A8MZF0 331 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 KLF4O43474 513 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 IL11P20809 199 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms