RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 NANOS3P60323 173 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 Q6ZS49 121 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 MOGAT3Q86VF5 341 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 OR10AC1Q8NH08 325 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 KCNK17Q96T54 332 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 H0YL77 283 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 CTAG1AP78358 180 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 J3QR06 171 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 CISD3P0C7P0 127 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LINC00271P0C7V0 271 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM196Q5HYL7 178 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 ZNF880Q6PDB4 577 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 H1FXQ92522 213 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LINC00470Q9BZP3 86 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 RNF186Q9NXI6 227 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 GCHFRP30047 84 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 SIGLEC14Q08ET2 396 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 OR2Z1Q8NG97 314 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 HS3ST3B1Q9Y662 390 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 WNT9BO14905 357 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 HYAL3O43820 417 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 RBP4P02753 201 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 SRP19P09132 144 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 PAX1P15863 534 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 YRDCQ86U90 279 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 FRMPD3Q5JV73 1810 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 CDIPTO14735 213 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 ZFP36L2P47974 494 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LPAR2Q9HBW0 351 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM50AO95807 157 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TIMM23BQ5SRD1 257 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LILRA6Q6PI73 481 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 FADS6Q8N9I5 356 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LRRC61Q9BV99 259 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 TRBV23-1A0A0A0MS06 115 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 LIFP15018 202 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 HIST3H2BBQ8N257 126 aa5.66□□□□□ -1.5
VPS13B-202ENST00000357162 DOK4Q8TEW6 326 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 APOBEC4Q8WW27 367 aaKnown RBP5.65□□□□□ -1.5
VPS13B-202ENST00000357162 SCARF2Q96GP6 870 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-202ENST00000357162 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.5
VPS13B-202ENST00000357162 hCG_38984A0A1B0GV85 526 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM11P17152 192 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 CCL20P78556 96 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 Q5PR19 223 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 FAM234AQ9H0X4 552 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 GPR183P32249 361 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 SHISA5Q8N114 240 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 LYL1P12980 280 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 C1orf162Q8NEQ5 155 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-202ENST00000357162 OR4D5Q8NGN0 318 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 CA5BP1Q8WTZ4 195 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 OR5P3Q8WZ94 311 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 MGAM2Q2M2H8 2515 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 F5H697 171 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 TMEM177Q53S58 311 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 LRRC75AQ8NAA5 344 aa5.65□□□□□ -1.5
VPS13B-202ENST00000357162 IGLV1-36A0A0B4J1U3 117 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 UMODP07911 640 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 RPRMQ9NS64 109 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 SOCS1O15524 211 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 SPANXN1Q5VSR9 72 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 TRMT61AQ96FX7 289 aaKnown RBP5.65□□□□□ -1.51
VPS13B-202ENST00000357162 RASL10BQ96S79 203 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 ADAD2Q8NCV1 583 aaKnown RBP5.65□□□□□ -1.51
VPS13B-202ENST00000357162 TSPAN2O60636 221 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 PGFP49763 221 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 UBE2V1Q13404 147 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 LRRC29Q8WV35 223 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 GPR146Q96CH1 333 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 NPIPB11E5RHQ5 1161 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 CXCL13O43927 109 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 NUDT11Q96G61 164 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 SGK494Q96LW2 274 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 TNFRSF19Q9NS68 423 aa5.65□□□□□ -1.51
VPS13B-202ENST00000357162 IL11P20809 199 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 PTGER1P34995 402 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 FGFRL1Q8N441 504 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 OR2K2Q8NGT1 345 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 CITED1Q99966 193 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 A0A0G2JK05 382 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 SNAI3Q3KNW1 292 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 FBLN7Q53RD9 439 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 TSPO2Q5TGU0 170 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 SPRED2Q7Z698 418 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 RELTQ969Z4 430 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 SSBP4Q9BWG4 385 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 GFRA4Q9GZZ7 299 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 UNC79Q9P2D8 2635 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 IGHV1OR21-1A0A087WYE8 117 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 OTX1P32242 354 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 LYZP61626 148 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 CACNG7P62955 275 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms