RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SAA1P0DJI8 122 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 MECP2P51608 486 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 DYNLT3P51808 116 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 PSG5Q15238 335 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZNF600Q6ZNG1 722 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 LCNL1Q6ZST4 164 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZNF695Q8IW36 515 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 OR8H3Q8N146 312 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ARL6IP6Q8N6S5 226 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 MINDY2Q8NBR6 621 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 FLYWCH2Q96CP2 140 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 ZNF486Q96H40 463 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 RHOVQ96L33 236 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 RBM14Q96PK6 669 aaKnown RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 SLC25A21Q9BQT8 299 aaPredicted RBP3.19□□□□□ -1.9
LIG4-201ENST00000356922 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 NAA60Q9H7X0 242 aa3.19□□□□□ -1.9
LIG4-201ENST00000356922 A0A0A6YYJ9 748 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 TRIM77I1YAP6 450 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 CCSO14618 274 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SNAPC5O75971 98 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 NXPH3O95157 252 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 MOSP00540 346 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 BPIFB3P59826 476 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 KRTAP10-3P60369 221 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 UBA52P62987 128 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 TMEM177Q53S58 311 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 TMEM128Q5BJH2 165 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SPINK9Q5DT21 86 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 DHRS7BQ6IAN0 325 aaPredicted RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 ZNF66Q6ZN08 573 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SELENOHQ8IZQ5 122 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 CADM3Q8N126 398 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SLC35G3Q8N808 338 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SSMEM1Q8WWF3 244 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 CITED4Q96RK1 184 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 HSD17B10Q99714 261 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 MDFIQ99750 246 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 C1RLQ9NZP8 487 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 VPREB3Q9UKI3 123 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 NAP1L6A6NFF2 107 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 MARCH11A6NNE9 402 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 G3V318 75 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 RGS13O14921 159 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SSNA1O43805 119 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 ATG12O94817 140 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SIX6O95475 246 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 H2AFB2P0C5Z0 115 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 CXCL3P19876 107 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 UCP1P25874 307 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 RND3P61587 244 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SURF2Q15527 256 aaPredicted RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 KRTAP24-1Q3LI83 254 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR4A47Q6IF82 309 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 Q6ZSV7 163 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR10W1Q8NGF6 305 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR4C13Q8NGP0 309 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 GALNT14Q96FL9 552 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR10C1Q96KK4 312 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 HARBI1Q96MB7 349 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SLC25A33Q9BSK2 321 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 GHITMQ9H3K2 345 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 ZNF430Q9H8G1 570 aaPredicted RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 ENY2Q9NPA8 101 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 WASHC3Q9Y3C0 194 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 IGHV7-81A0A0B4J1V7 117 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 C13orf42A0A1B0GVH6 325 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 INMT-MINDY4F8WBC2 141 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 WRBO00258 174 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 SOX15O60248 233 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 NDUFA3O95167 84 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 DHFRP00374 187 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 HLA-AP01891 365 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 MC5RP33032 325 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 THBS3P49746 956 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR2B8PP59922 312 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 CX3CL1P78423 397 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 DEFA5Q01523 94 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 ASPHD1Q5U4P2 390 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 TMEM268Q5VZI3 342 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 FAM71F2Q6NXP2 309 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 THNSL2Q86YJ6 484 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 PUSL1Q8N0Z8 303 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 NPBQ8NG41 125 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 OR2T10Q8NGZ9 312 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 DEDD2Q8WXF8 326 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 TMEM56Q96MV1 263 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 C7orf50Q9BRJ6 194 aaKnown RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 GPN1Q9HCN4 374 aaPredicted RBP3.18□□□□□ -1.9
LIG4-201ENST00000356922 SERTAD4Q9NUC0 356 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 TMEM56-RWDD3S4R434 201 aa3.18□□□□□ -1.9
LIG4-201ENST00000356922 C5orf51A6NDU8 294 aa3.17□□□□□ -1.9
LIG4-201ENST00000356922 HMX3A6NHT5 357 aa3.17□□□□□ -1.9
LIG4-201ENST00000356922 OOSP1A8MZH6 123 aa3.17□□□□□ -1.9
LIG4-201ENST00000356922 H0Y980 276 aa3.17□□□□□ -1.9
LIG4-201ENST00000356922 RRHO14718 337 aa3.17□□□□□ -1.9
LIG4-201ENST00000356922 TXNL1O43396 289 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms