RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 ZNF439Q8NDP4 499 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 DUSP23Q9BVJ7 150 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 HIPK2Q9H2X6 1198 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 GNB4Q9HAV0 340 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 DUSP13Q9UII6 198 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A10PA6NDY2 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A18PA6NE21 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A16PA6NEW6 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 CBY3A6NI87 242 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A20PA6NIJ5 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A8PA6NJQ4 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A7PA6NKC0 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A22PA8MWA6 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A12PA8MX19 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A5PA8MXJ8 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A23PA8MXZ1 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 PDE6DO43924 150 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A15PP0C7V4 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A13PP0C7W8 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A14PP0C7W9 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 FAM90A24PP0C7X0 464 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 BTF3P20290 206 aaKnown RBP11.38□□□□□ -0.59
TRIM4-203ENST00000355947 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
TRIM4-203ENST00000355947 ERVK-16P61578 105 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 Q0VFX4 171 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 COL5A1-AS1Q5SY13 56 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 RNF138Q8WVD3 245 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 BOKQ9UMX3 212 aaPredicted RBP11.38□□□□□ -0.59
TRIM4-203ENST00000355947 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 BOD1L1Q8NFC6 3051 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 TMEM30CPA0ZSE6 113 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 TMEM210A6NLX4 147 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 DCAF10Q5QP82 559 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 RIPPLY2Q5TAB7 128 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 AGMATQ9BSE5 352 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 IGHV3OR15-7A0A075B7D8 119 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 GNG4P50150 75 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 COA6Q5JTJ3 125 aaKnown RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 DEFB108BQ8NET1 73 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 DNASE2BQ8WZ79 361 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 POM121L2Q96KW2 1035 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 OR5B21A6NL26 309 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 HCFC1P51610 2035 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 LCN2P80188 198 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 VAMP3Q15836 100 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 MOB3BQ86TA1 216 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 RCHY1Q96PM5 261 aa11.37□□□□□ -0.59
TRIM4-203ENST00000355947 ZNF703Q9H7S9 590 aaPredicted RBP11.37□□□□□ -0.59
TRIM4-203ENST00000355947 TOX4O94842 621 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 SFTPCP11686 197 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
TRIM4-203ENST00000355947 ZNF645Q8N7E2 425 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 STPG4Q8N801 248 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 OR13A1Q8NGR1 328 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 SPSB4Q96A44 273 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 NRN1Q9NPD7 142 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 POLDIP2Q9Y2S7 368 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 SPTA1P02549 2419 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 LOC400499M0QZD8 3231 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 TIMM8AO60220 97 aaPredicted RBP11.36□□□□□ -0.59
TRIM4-203ENST00000355947 TNFSF13O75888 250 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 VENTXO95231 258 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 NCKAP5O14513 1909 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 TPTE2P1Q5T6R2 138 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 Q6P435 159 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 C5orf30Q96GV9 206 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 MCRIP2Q9BUT9 160 aaKnown RBP11.36□□□□□ -0.59
TRIM4-203ENST00000355947 MPC1Q9Y5U8 109 aa11.36□□□□□ -0.59
TRIM4-203ENST00000355947 M0QZK8 103 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 PLAUP00749 431 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 WNT2P09544 360 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 ARR3P36575 388 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 RELBQ01201 579 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 Q6ZSR3 168 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
TRIM4-203ENST00000355947 DYSFO75923 2080 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 C15orf62A8K5M9 175 aa11.35□□□□□ -0.59
TRIM4-203ENST00000355947 HSBP1O75506 76 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms