RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 NINJ1Q92982 152 aa6.56□□□□□ -1.36
CD46-203ENST00000354848 LRRC61Q9BV99 259 aa6.56□□□□□ -1.36
CD46-203ENST00000354848 MED12LQ86YW9 2145 aa6.56□□□□□ -1.36
CD46-203ENST00000354848 TRAV24A0A0B4J272 114 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 B4GALT1P15291 398 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 FASLGP48023 281 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 RBPJQ06330 500 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 ZNF816Q0VGE8 651 aaPredicted RBP6.55□□□□□ -1.36
CD46-203ENST00000354848 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 NFAM1Q8NET5 270 aaPredicted RBP6.55□□□□□ -1.36
CD46-203ENST00000354848 OR1B1Q8NGR6 318 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 RLN3Q8WXF3 142 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 DEFB118Q96PH6 123 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 hDV102S1A0JD36 115 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 C3orf80F5H4A9 247 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 SYNGR1O43759 233 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 GOSR1O95249 250 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 USF1P22415 310 aaPredicted RBP6.55□□□□□ -1.36
CD46-203ENST00000354848 COL8A2P25067 703 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 GCHFRP30047 84 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 LGALS7P47929 136 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 GNG4P50150 75 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 PQLC2Q6ZP29 291 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 SPACA3Q8IXA5 215 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 MKXQ8IYA7 352 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 FGFBP3Q8TAT2 258 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 PRDM6Q9NQX0 595 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 ARL2-SNX15V9GYD0 113 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 ASXL3Q9C0F0 2248 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 LAMA1P25391 3075 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 GJE1A6NN92 205 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 C15orf62A8K5M9 175 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 RAB29O14966 203 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 OPRK1P41145 380 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 MIC13Q5XKP0 118 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 SLC25A40Q8TBP6 338 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 TMEM45BQ96B21 275 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 ZNF488Q96MN9 340 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 COMMD5Q9GZQ3 224 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 CHRNA10Q9GZZ6 450 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 OSTCQ9NRP0 149 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 TNFRSF19Q9NS68 423 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 TMEM38BQ9NVV0 291 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 CLEC5AQ9NY25 188 aa6.55□□□□□ -1.36
CD46-203ENST00000354848 TNRC6BQ9UPQ9 1833 aaKnown RBP6.55□□□□□ -1.36
CD46-203ENST00000354848 SMIM27A0A1W2PRY6 76 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 TNFSF15O95150 251 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 VAMP5O95183 116 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 NHLH1Q02575 133 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 C1orf53Q5VUE5 145 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 RNASEKQ6P5S7 137 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 S100A7AQ86SG5 101 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 SPSB4Q96A44 273 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 TMEM186Q96B77 213 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 OR2H1Q9GZK4 316 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 HELTA6NFD8 242 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 LILRA5A6NI73 299 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 IGHV4-34P06331 123 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 FKBP2P26885 142 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 SPATA46Q5T0L3 261 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 UFSP1Q6NVU6 142 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 TREML4Q6UXN2 200 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 ZNF841Q6ZN19 808 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 OR1N2Q8NGR9 330 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 MGST2Q99735 147 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 ZNF331Q9NQX6 463 aaPredicted RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 DLL3Q9NYJ7 618 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 MMP17Q9ULZ9 603 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 TNRC6AQ8NDV7 1962 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 A0A087X0K7 114 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 A0A1B0GX78 115 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 C7orf71A4D174 169 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 C9orf172C9J069 976 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 CDIPTO14735 213 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 CRXO43186 299 aaPredicted RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 MPDU1O75352 247 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 FOXH1O75593 365 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 SPINK2P20155 84 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 CRYBB3P26998 211 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 NTF4P34130 210 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 RPL30P62888 115 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 ZXDAP98168 799 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 NOGQ13253 232 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 CEACAM21Q3KPI0 293 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 PRAMEF20Q5VT98 475 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 SAMD13Q5VXD3 122 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 SPATA31B1PQ5VZV4 182 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 PRSS57Q6UWY2 283 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 ANKRD37Q7Z713 158 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 FADS6Q8N9I5 356 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 OR2T6Q8NHC8 308 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 SF3B5Q9BWJ5 86 aaKnown RBP6.54□□□□□ -1.36
CD46-203ENST00000354848 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
CD46-203ENST00000354848 CLCF1Q9UBD9 225 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms