RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CXCL2P19875 107 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ASIPP42127 132 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 TMEM211Q6ICI0 200 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF645Q8N7E2 425 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 CISD1Q9NZ45 108 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 MPC1Q9Y5U8 109 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 TCTEX1D4Q5JR98 221 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 SIGLEC7Q9Y286 467 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 TRAV24A0A0B4J272 114 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 NUTF2P61970 127 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ITLN2Q8WWU7 325 aaPredicted RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 GTF3AQ92664 365 aaKnown RBP6.95□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF479Q96JC4 524 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 F8WEM9 126 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 DLL1O00548 723 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 DPM2O94777 84 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 CCL4L1Q8NHW4 92 aa6.95□□□□□ -1.3
SCN8A-201ENST00000354534 TAF1P21675 1872 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ATP5G2Q06055 141 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 IL11RAQ14626 422 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 C10orf35Q96D05 121 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 DCTN5Q9BTE1 182 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF576Q9H609 170 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 IGHV3-48P01763 117 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCN8A-201ENST00000354534 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 RNF7Q9UBF6 113 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 IFI27P40305 119 aaPredicted RBP6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TRGV2A0A075B6R0 118 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 POU2AF1Q16633 256 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 RIPPLY2Q5TAB7 128 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TMEFF2Q9UIK5 374 aaPredicted RBP6.94□□□□□ -1.3
SCN8A-201ENST00000354534 PLPP3O14495 311 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 C3AR1Q16581 482 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 CENPVQ7Z7K6 275 aaPredicted RBP6.94□□□□□ -1.3
SCN8A-201ENST00000354534 C17orf47Q8NEP4 570 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 OR4X2Q8NGF9 303 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TLNRD1Q9H1K6 362 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ANAPC10Q9UM13 185 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 COL6A6A6NMZ7 2263 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 PCNX1Q96RV3 2341 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 KLK8O60259 260 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ASB10Q8WXI3 467 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TMEM229AB2RXF0 380 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 C8orf88P0DMB2 117 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
SCN8A-201ENST00000354534 C12orf73Q69YU5 71 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 LRTM2Q8N967 370 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF488Q96MN9 340 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 TXNDC17Q9BRA2 123 aa6.94□□□□□ -1.3
SCN8A-201ENST00000354534 PTP4A3O75365 173 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 TBR1Q16650 682 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 LINC00305Q7Z4B0 112 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 VSTM2LQ96N03 204 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 SEMA5BQ9P283 1151 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 SERGEFQ9UGK8 458 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
SCN8A-201ENST00000354534 NRXN3Q9Y4C0 1643 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 PQLC2LA1A4F0 135 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE12JA6NER3 117 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE1Q13065 139 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE4Q13068 117 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE5Q13069 117 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 GAGE6Q13070 117 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 XAF1Q6GPH4 301 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 NDUFC2O95298 119 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 TMEM74BQ9NUR3 256 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 NPPCP23582 126 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 TRAV8-3A0A0A6YYJ7 113 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 H0Y980 276 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 PAX4O43316 350 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 UMODP07911 640 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 EVI2AP22794 236 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 DUTP33316 252 aaKnown RBP6.93□□□□□ -1.3
SCN8A-201ENST00000354534 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ARFGEF3Q5TH69 2177 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ADMP35318 185 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ERVK11-1P61568 191 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 RPL8P62917 257 aaKnown RBP6.93□□□□□ -1.3
SCN8A-201ENST00000354534 CD69Q07108 199 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ICAM4Q14773 271 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 MS4A5Q9H3V2 200 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 KLF12Q9Y4X4 402 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
SCN8A-201ENST00000354534 CLDND2Q8NHS1 167 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 RND3P61587 244 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 IL36BQ9NZH7 164 aa6.93□□□□□ -1.3
SCN8A-201ENST00000354534 ADARB2-AS1A8MUL3 147 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 MGST3O14880 152 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 MOSP00540 346 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 CD300LDQ6UXZ3 194 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms