RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 KRTAP10-3P60369 221 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 NHLH2Q02577 135 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 TNFRSF9Q07011 255 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 KIAA2026Q5HYC2 2103 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 FAM201AQ5SY85 155 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 SPAG16Q8N0X2 631 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 ZNF439Q8NDP4 499 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 RFESDQ8TAC1 157 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 GNPNAT1Q96EK6 184 aaPredicted RBP6.69□□□□□ -1.34
CD44-205ENST00000352818 ADTRPQ96IZ2 230 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 ATP5SQ99766 215 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 MAGT1Q9H0U3 335 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 IDI2-AS1Q9NZ38 188 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 RNF150Q9ULK6 438 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 PPIAL4AQ9Y536 164 aa6.69□□□□□ -1.34
CD44-205ENST00000352818 PPIAL4EA0A075B759 164 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 LINC00473A8K010 186 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 PPIAL4DF5H284 164 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 NDUFA2O43678 99 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 RAMP3O60896 148 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 FBXO24O75426 580 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 CRYZL1O95825 349 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 TSPAN15O95858 294 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 GYPAP02724 150 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 PPIAL4FP0DN26 164 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 SELLP14151 372 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 THBS3P49746 956 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 DYNLT3P51808 116 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 UBE2KP61086 200 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 HBG1P69891 147 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 HBG2P69892 147 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 CCL8P80075 99 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 ZNF816Q0VGE8 651 aaPredicted RBP6.68□□□□□ -1.34
CD44-205ENST00000352818 C10orf91Q5T1B1 145 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 FAM53AQ6NSI3 398 aaPredicted RBP6.68□□□□□ -1.34
CD44-205ENST00000352818 DPPA3Q6W0C5 159 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 Q6ZRG5 221 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 MUC15Q8N387 334 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 FAM216BQ8N7L0 139 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 LFNGQ8NES3 379 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 OR5C1Q8NGR4 320 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 DDB2Q92466 427 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 DUX5Q96PT3 197 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 CIB3Q96Q77 187 aaPredicted RBP6.68□□□□□ -1.34
CD44-205ENST00000352818 CCL13Q99616 98 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 GAL3ST2Q9H3Q3 398 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 DYNLRB1Q9NP97 96 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.68□□□□□ -1.34
CD44-205ENST00000352818 TMEM106BQ9NUM4 274 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 PSENENQ9NZ42 101 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 RPUSD1Q9UJJ7 312 aaKnown RBP6.68□□□□□ -1.34
CD44-205ENST00000352818 PRELID3BQ9Y3B1 194 aa6.68□□□□□ -1.34
CD44-205ENST00000352818 LOC105371242A0A075B767 164 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 A0A1B0GW64 132 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 TMEM218A2RU14 115 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 MARCH11A6NNE9 402 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 PPIHO43447 177 aaKnown RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 PROP1O75360 226 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 ATP6V0CP27449 155 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 G6PCP35575 357 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 PPOXP50336 477 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 ZNF134P52741 427 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 CLINT1Q14677 625 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 POU2AF1Q16633 256 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 NCR3LG1Q68D85 454 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 FAM71F2Q6NXP2 309 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 DUX4L9Q6RFH8 374 aaPredicted RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 BTNL3Q6UXE8 466 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 SLC25A48Q6ZT89 311 aaKnown RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 H2BFWTQ7Z2G1 175 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 PUSL1Q8N0Z8 303 aaKnown RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 C8orf31Q8N9H6 132 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 BPIFCQ8NFQ6 507 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 OR52E5Q8NH55 327 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 OR4S2Q8NH73 311 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 MRAPQ8TCY5 172 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 WFDC12Q8WWY7 111 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 R3HDM4Q96D70 268 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 RAB39BQ96DA2 213 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 CITED1Q99966 193 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 PSMG3Q9BT73 122 aaPredicted RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 RBKSQ9H477 322 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 NARFLQ9H6Q4 476 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 HIF1ANQ9NWT6 349 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 DCAF16Q9NXF7 216 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 SLC25A10Q9UBX3 287 aaPredicted RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 CARHSP1Q9Y2V2 147 aaKnown RBP6.67□□□□□ -1.34
CD44-205ENST00000352818 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
CD44-205ENST00000352818 SAA2-SAA4A0A096LPE2 208 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 IGHV1-69-2A0A0G2JMI3 117 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 BTBD17A6NE02 478 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 M0R1X1 148 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 FCGR3BO75015 233 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 CST7O76096 145 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 KRASP01116 189 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms