RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 EFNB1P98172 346 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 GALNT14Q96FL9 552 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 ID1P41134 155 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 PSMB2P49721 201 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 TMEM186Q96B77 213 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 SLC25A33Q9BSK2 321 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF319Q9P2F9 582 aa13.56□□□□□ -0.24
PTPN11-201ENST00000351677 MOSP00540 346 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 TRGC1P0CF51 173 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 NMUP48645 174 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 GFRA1P56159 465 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 HERVK_113P61574 105 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 SNCGO76070 127 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 GLRXP35754 106 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 ABLIM2Q6H8Q1 611 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 METTL26Q96S19 204 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 UCP1P25874 307 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 MFAP4P55083 255 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 TFF3Q07654 80 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 GCHFRP30047 84 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 CFHR1Q03591 330 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 MARVELD3Q96A59 401 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
PTPN11-201ENST00000351677 CLEC7AQ9BXN2 247 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 RPL24P83731 157 aaKnown RBP13.55□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
PTPN11-201ENST00000351677 GRIFINA4D1Z8 144 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 SRSF9Q13242 221 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN11-201ENST00000351677 PCSK4Q6UW60 755 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 GP6Q9HCN6 339 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 IGHV3-35A0A0C4DH35 117 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 AMY1AP04745 511 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 MST1P26927 711 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 FAM216BQ8N7L0 139 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 CACNA1EQ15878 2313 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 LOC105371242A0A075B767 164 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 NPIPB7O75200 414 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 HLA-DQA1P01909 254 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
PTPN11-201ENST00000351677 PQLC2LA1A4F0 135 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 LHX2P50458 406 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF506Q5JVG8 444 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 NEU1Q99519 415 aa13.54□□□□□ -0.24
PTPN11-201ENST00000351677 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
PTPN11-201ENST00000351677 IGHV2OR16-5A0A0B4J2B6 119 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 IL6RP08887 468 aaPredicted RBP13.53□□□□□ -0.24
PTPN11-201ENST00000351677 SSBP3Q9BWW4 388 aaPredicted RBP13.53□□□□□ -0.24
PTPN11-201ENST00000351677 ZNF883P0CG24 379 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 CKS2P33552 79 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 TNFSF10P50591 281 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 DEPPQ9NTK1 212 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 SRIP30626 198 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 SPATA45Q537H7 98 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 SRSF12Q8WXF0 261 aaKnown RBP13.53□□□□□ -0.24
PTPN11-201ENST00000351677 WDYHV1Q96HA8 205 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 NRN1LQ496H8 165 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 C5orf52A6NGY3 159 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 RTTNQ86VV8 2226 aa13.53□□□□□ -0.24
PTPN11-201ENST00000351677 LY6EQ16553 131 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 RNFT1Q5M7Z0 435 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 WBP1Q96G27 269 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 IGHV3OR16-10A0A075B7F0 116 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 RNF126Q9BV68 326 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 ZFP30Q9Y2G7 519 aa13.52□□□□□ -0.24
PTPN11-201ENST00000351677 MAS1LP35410 378 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 TM4SF20Q53R12 229 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 PAQR4Q8N4S7 273 aaPredicted RBP13.52□□□□□ -0.25
PTPN11-201ENST00000351677 LOC102723996A0A087X1L8 192 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 CENPWQ5EE01 88 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 ATRAIDQ6UW56 229 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 BIVMQ86UB2 503 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 C9orf106Q8NAJ2 232 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 OR10S1Q8NGN2 331 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 A0A0A6YYD4 124 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 A8MXK9 166 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 GCGP01275 180 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 LIPFP07098 398 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 OTX1P32242 354 aaPredicted RBP13.52□□□□□ -0.25
PTPN11-201ENST00000351677 LY6G6FQ5SQ64 297 aa13.52□□□□□ -0.25
PTPN11-201ENST00000351677 LOC102724200A0A096LPH7 203 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 IGKV1D-13A0A0B4J2D9 117 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 TFF1P04155 84 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 A6NDN8 102 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 LINC00305Q7Z4B0 112 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 ELOVL5Q9NYP7 299 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms