RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ACTL10Q5JWF8 245 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 SPATA31B1PQ5VZV4 182 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 DUX4L9Q6RFH8 374 aaPredicted RBP14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 TCF23Q7RTU1 214 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 FAM90A1Q86YD7 464 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 DMXL2Q8TDJ6 3036 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 IGHG3P01860 377 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 RNF224P0DH78 156 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 VDAC2P45880 294 aaPredicted RBP14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 THBS3P49746 956 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 HTD2P86397 168 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 VHLLQ6RSH7 139 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 NUPR1O60356 82 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 GFRA3O60609 400 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 HPRT1P00492 218 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 ADH4P08319 380 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 LOXL3P58215 753 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 RELBQ01201 579 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 GCSAMQ8N6F7 178 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 DIRC2Q96SL1 478 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 TNCP24821 2201 aa14.95□□□□□ -0.02
PTP4A3-202ENST00000349124 SCO2A0A1W2PP80 73 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 FOXH1O75593 365 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 TMEM256Q8N2U0 113 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 GGTLC1Q9BX51 225 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 PXMP4Q9Y6I8 212 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 PTPRBP23467 1997 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 TET2Q6N021 2002 aaPredicted RBP14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 DVL1O14640 695 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 SPCS3P61009 180 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 PDLIM3Q53GG5 364 aaPredicted RBP14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 COA6Q5JTJ3 125 aaKnown RBP14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 TCTEX1D1Q8N7M0 179 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 FAM122AQ96E09 287 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 IFI27L2Q9H2X8 130 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 SEPSECSQ9HD40 501 aaKnown RBP14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 TMEM140Q9NV12 185 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 PRSS46E5RG02 174 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 TSTD3H0UI37 97 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 VENTXO95231 258 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 SNRPCP09234 159 aaKnown RBP14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 ZNF83P51522 516 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 MOGAT3Q86VF5 341 aa14.94□□□□□ -0.02
PTP4A3-202ENST00000349124 REC114Q7Z4M0 266 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 SGMS2Q8NHU3 365 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 YTHDF2Q9Y5A9 579 aaKnown RBP14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 PLCE1Q9P212 2302 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 ZNF891A8MT65 544 aaPredicted RBP14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 SPRY3O43610 288 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 TNFSF13O75888 250 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 SRP14P37108 136 aaKnown RBP14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 OR5R1Q8NH85 324 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 STARD4Q96DR4 205 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 S1PR3Q99500 378 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 ZNF71Q9NQZ8 489 aaPredicted RBP14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
PTP4A3-202ENST00000349124 M0R296 226 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 IGLV1-44P01699 117 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 CD33P20138 364 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 ARSJQ5FYB0 599 aaPredicted RBP14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 DMRTC2Q8IXT2 367 aaPredicted RBP14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 OCC1Q8TAD7 63 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 OR2V2Q96R30 315 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 HINT2Q9BX68 163 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 TCF19Q9Y242 345 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 ADGRG4Q8IZF6 3080 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 SRRM5B3KS81 715 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 PDE6DO43924 150 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 OR4A8P0C604 315 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 RPL15P61313 204 aaKnown RBP14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 CISD2Q8N5K1 135 aaKnown RBP14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 ZNRD1Q9P1U0 126 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 TRAPPC1Q9Y5R8 145 aa14.92□□□□□ -0.02
PTP4A3-202ENST00000349124 FRMD6-AS1P0C7T7 363 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 PDLIM4P50479 330 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 TRIP6Q15654 476 aaKnown RBP14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 CT45A1Q5HYN5 189 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 MBNL2Q5VZF2 373 aaKnown RBP14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 MOB3BQ86TA1 216 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 DEFB108BQ8NET1 73 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 CT45A3Q8NHU0 189 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 PLSCR4Q9NRQ2 329 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 AHRRA9YTQ3 701 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 TYMSP04818 313 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 OPRK1P41145 380 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 HLA-DRB5Q30154 266 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 SEM1Q6ZVN7 128 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 MRPL41Q8IXM3 137 aaKnown RBP14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 RPRMLQ8N4K4 120 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 ACY3Q96HD9 319 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 SFRP2Q96HF1 295 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 KCNIP2Q9NS61 270 aa14.91□□□□□ -0.02
PTP4A3-202ENST00000349124 ARFGEF3Q5TH69 2177 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 SLC17A3O00476 420 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 STAG3L2P0CL84 134 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 STAG3L3P0CL85 134 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 NDUFB7P17568 137 aa14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 CNN1P51911 297 aaKnown RBP14.9□□□□□ -0.02
PTP4A3-202ENST00000349124 ERVK-16P61578 105 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms