RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RPL27AP46776 148 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 INSL3P51460 131 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 TAS2R31P59538 309 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 EIF4EBP1Q13541 118 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 KIAA0141Q14154 515 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 RNASE10Q5GAN6 216 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 DMBX1Q8NFW5 382 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 TMEM167AQ8TBQ9 72 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 USMG5Q96IX5 58 aa12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 RANGRFQ9HD47 186 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-201ENST00000346501 OVOL1O14753 267 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 BRI3O95415 125 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 TBPP20226 339 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 ZP3P21754 424 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 GNRHRP30968 328 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 HOXD3P31249 432 aaPredicted RBP12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 RPL8P62917 257 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 DGCR2P98153 550 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 LYSMD2Q8IV50 215 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 TINAGL1Q9GZM7 467 aaPredicted RBP12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 PLEKHA2Q9HB19 425 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-201ENST00000346501 CCDC160A6NGH7 325 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 RLN1P04808 185 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 APELAP0DMC3 54 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 F2RP25116 425 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 SPCS2Q15005 226 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 TATDN3Q17R31 274 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 RNASE12Q5GAN4 147 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 FYTTD1Q96QD9 318 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 BET1LQ9NYM9 111 aa12.22□□□□□ -0.45
TSPAN4-201ENST00000346501 FAM223BA6NKX1 122 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 CYB5BO43169 146 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 PGLYRP1O75594 196 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 VAX1Q5SQQ9 334 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 OR4A47Q6IF82 309 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 FAM223AQ8IWN6 122 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 SLC38A6Q8IZM9 456 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 DGCR14Q96DF8 476 aaKnown RBP12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 DIRAS2Q96HU8 199 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 COMMD5Q9GZQ3 224 aa12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 C6orf62Q9GZU0 229 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 ALX4Q9H161 411 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-201ENST00000346501 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 A0A087WW49 117 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 SNAPC5O75971 98 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 PGAM2P15259 253 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 HLA-GP17693 338 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 UCP3P55916 312 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 TAS2R19P59542 299 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 SSBP1Q04837 148 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ATP5G2Q06055 141 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ARRDC1Q8N5I2 433 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 TTC9CQ8N5M4 171 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ADAD2Q8NCV1 583 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 OR52I2Q8NH67 350 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 OR4C12Q96R67 309 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 KLK11Q9UBX7 282 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 MTFP1Q9UDX5 166 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF257Q9Y2Q1 563 aa12.2□□□□□ -0.46
TSPAN4-201ENST00000346501 ANKRD34BA5PLL1 514 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 M0QYG6 137 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 CTDSP2O14595 271 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 SAP30O75446 220 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 DEFA4P12838 97 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 SLURP1P55000 103 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 IL18Q14116 193 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 POU2AF1Q16633 256 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 PHLDA2Q53GA4 152 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 ASPHD1Q5U4P2 390 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 LAX1Q8IWV1 398 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 ISOC1Q96CN7 298 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 FXYD6Q9H0Q3 95 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 PEF1Q9UBV8 284 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-201ENST00000346501 S1PR2O95136 353 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 CD3DP04234 171 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 FGF2P09038 288 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms