RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PRNDQ9UKY0 176 aa17.37■□□□□ 0.37
TSPAN3-202ENST00000346495 IGHV4-30-2A0A087WSY4 118 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 SAA1P0DJI8 122 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 DVL1P1P54792 670 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 TMEM267Q0VDI3 215 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 ZNF266Q14584 549 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 TPTE2P1Q5T6R2 138 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 MOB3BQ86TA1 216 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 OR5C1Q8NGR4 320 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 VSTM2AQ8TAG5 236 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 MS4A7Q9GZW8 240 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 ARV1Q9H2C2 271 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 FAM157AC9JC47 383 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 TOX4O94842 621 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 TMEM217Q8N7C4 229 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 OR4A5Q8NH83 315 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 RBMXL1Q96E39 390 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 FKBP11Q9NYL4 201 aa17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 STRAPQ9Y3F4 350 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-202ENST00000346495 AKAP6Q13023 2319 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 METTL15P1P0C7V9 234 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 HOXB4P17483 251 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 LGALS7P47929 136 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 HSPE1P61604 102 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 CLINT1Q14677 625 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 SPINK9Q5DT21 86 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 TMEM14EPQ6UXP3 125 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 TCF19Q9Y242 345 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 ZNF257Q9Y2Q1 563 aa17.35■□□□□ 0.37
TSPAN3-202ENST00000346495 FAM208BQ5VWN6 2430 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 DFFBO76075 338 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 KBTBD11O94819 623 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 FGF2P09038 288 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 HBG1P69891 147 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 HBG2P69892 147 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 FAM74A1Q5RGS3 127 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 STPG2Q8N412 459 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 PCNPQ8WW12 178 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 TMED6Q8WW62 240 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 GINS3Q9BRX5 216 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 HIPK2Q9H2X6 1198 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 OR51B2Q9Y5P1 312 aa17.34■□□□□ 0.37
TSPAN3-202ENST00000346495 IGHV3-72A0A0B4J1Y9 119 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 A0A1W2PPI3 338 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 LINC00862A6NCI5 91 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 RNASEK-C17orf49H0YIS7 233 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 NMBP08949 121 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 RPP30P78346 268 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 VMA21Q3ZAQ7 101 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 TSNAXQ99598 290 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 ATP5SQ99766 215 aa17.33■□□□□ 0.37
TSPAN3-202ENST00000346495 TET2Q6N021 2002 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-202ENST00000346495 SCAF4O95104 1147 aaKnown RBP17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 IGLV2-23P01705 113 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 SLC25A16P16260 332 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 USF1P22415 310 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 VDAC2P45880 294 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 LDLRAD2Q5SZI1 272 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 MINOS1Q5TGZ0 78 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 PDZD9Q8IXQ8 264 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 TMEM167AQ8TBQ9 72 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 LRRC20Q8TCA0 184 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 OR4C12Q96R67 309 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 TBX15Q96SF7 602 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 MINOS1-NBL1R4GNA1 71 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 HOXA1P49639 335 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 CLEC12BQ2HXU8 276 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 LPAR2Q9HBW0 351 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 ENY2Q9NPA8 101 aa17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 HEYLQ9NQ87 328 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-202ENST00000346495 OOSP1A8MZH6 123 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 LGALS4P56470 323 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 HAPLN4Q86UW8 402 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 OR5B3Q8NH48 314 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 RNF141Q8WVD5 230 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 RNF5Q99942 180 aa17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 BEX4Q9NWD9 120 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-202ENST00000346495 FBXO24O75426 580 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 SEC11BP0C7V7 166 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 UBE2E1P51965 193 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 KRTAP10-9P60411 292 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 ARL16Q0P5N6 197 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 CCDC144NLQ6NUI1 221 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 LHFPL4Q7Z7J7 247 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 LILRB2Q8N423 598 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 TBL2Q9Y4P3 447 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 HILPDAQ9Y5L2 63 aa17.3■□□□□ 0.36
TSPAN3-202ENST00000346495 A0A1W2PRD5 423 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 A0A1W2PRF3 423 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 A0A1W2PRM7 423 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 TIMM23O14925 209 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 CD1BP29016 333 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 RPL8P62917 257 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 PRCDQ00LT1 54 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 PAX8Q06710 450 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 TEX45Q8NA69 505 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 TEX50A0A1B0GTY4 177 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 C15orf62A8K5M9 175 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 SLC25A17O43808 307 aa17.29■□□□□ 0.36
TSPAN3-202ENST00000346495 IFNA5P01569 189 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms