RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 P2RY4P51582 365 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 ST20Q9HBF5 79 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 OBSL1O75147 1896 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 ASAH2BP0C7U1 165 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 NANOS3P60323 173 aaKnown RBP16.7■□□□□ 0.26
HDAC4-201ENST00000345617 BEX4Q9NWD9 120 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-201ENST00000345617 TRBV20OR9-2A0A075B6H5 130 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 ORMDL3Q8N138 153 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 IL36BQ9NZH7 164 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 PGPEP1LA6NFU8 196 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 LIMS1P48059 325 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 MFAP4P55083 255 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 WDYHV1Q96HA8 205 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 GRIFINA4D1Z8 144 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 HOXA5P20719 270 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 NCOR1P1Q9H4R4 102 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 CYP2G1PQ6ZSU1 146 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 TMEM160Q9NX00 188 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 PGPEP1Q9NXJ5 209 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 RAX2Q96IS3 184 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 RLFQ13129 1914 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 FSCN3Q9NQT6 498 aa16.69■□□□□ 0.26
HDAC4-201ENST00000345617 IFITM3Q01628 133 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 CLDND2Q8NHS1 167 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 SRSF12Q8WXF0 261 aaKnown RBP16.68■□□□□ 0.26
HDAC4-201ENST00000345617 J3QW42 95 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 GCSAMLQ5JQS6 135 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 TIMM23BQ5SRD1 257 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 MIC13Q5XKP0 118 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 CCL27Q9Y4X3 112 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 ZNF56Q15929 161 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 BIVMQ86UB2 503 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 SELENOHQ8IZQ5 122 aaKnown RBP16.68■□□□□ 0.26
HDAC4-201ENST00000345617 TIMP4Q99727 224 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 LOXL3P58215 753 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 NUTF2P61970 127 aaKnown RBP16.68■□□□□ 0.26
HDAC4-201ENST00000345617 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 GPX1P07203 203 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 TINAGQ9UJW2 476 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 A0A0G2JMZ2 1700 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 LRRC37A2A6NM11 1700 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 LRRC37AA6NMS7 1700 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 FGFRL1Q8N441 504 aa16.68■□□□□ 0.26
HDAC4-201ENST00000345617 CT62P0C5K7 136 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 LINC00614P0C842 121 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 LINC00470Q9BZP3 86 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 POC1AQ8NBT0 407 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 LAMTOR2Q9Y2Q5 125 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 PPBPP02775 128 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 ATOH7Q8N100 152 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 YBX2Q9Y2T7 364 aaKnown RBP16.67■□□□□ 0.26
HDAC4-201ENST00000345617 A0A1W2PR80 420 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 UBE2CO00762 179 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 TBR1Q16650 682 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 RRHO14718 337 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 DXOO77932 396 aaKnown RBP16.67■□□□□ 0.26
HDAC4-201ENST00000345617 ERGP11308 486 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 ZNF324BQ6AW86 544 aaPredicted RBP16.67■□□□□ 0.26
HDAC4-201ENST00000345617 LIMS2Q7Z4I7 341 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 NPCDR1Q9BY65 106 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 TRAV8-2A0A0B4J237 113 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 VKORC1L1Q8N0U8 176 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 ZNF257Q9Y2Q1 563 aa16.67■□□□□ 0.26
HDAC4-201ENST00000345617 ZNF488Q96MN9 340 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-201ENST00000345617 OTX1P32242 354 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-201ENST00000345617 J3KRW8 73 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 OR52M1Q8NGK5 317 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 MGAMO43451 1857 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 CNTFRP26992 372 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 HSPE1P61604 102 aaKnown RBP16.66■□□□□ 0.26
HDAC4-201ENST00000345617 OR4D11Q8NGI4 311 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 TMEM170BQ5T4T1 132 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 PAX1P15863 534 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 TMPRSS3P57727 454 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 PRSS41Q7RTY9 318 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-201ENST00000345617 NPFFO15130 113 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 SPINK14Q6IE38 97 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 DNASE2BQ8WZ79 361 aa16.66■□□□□ 0.26
HDAC4-201ENST00000345617 PGLYRP1O75594 196 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-201ENST00000345617 FAM106AQ4KMX7 169 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 TRAV8-6A0A0B4J262 113 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 LOC390937A0A1W2PQ73 354 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 CT83Q5H943 113 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 SPAG8Q99932 426 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-201ENST00000345617 TCF20Q9UGU0 1960 aaKnown RBP16.65■□□□□ 0.26
HDAC4-201ENST00000345617 TRBV5-7A0A0A0MS05 114 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 SFTPCP11686 197 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 GPR183P32249 361 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 MPV17P39210 176 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 GZMMP51124 257 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 LHX9Q9NQ69 397 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 TMEM242Q9NWH2 141 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 MBD1Q9UIS9 605 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-201ENST00000345617 RCC1LQ96I51 464 aaKnown RBP16.65■□□□□ 0.26
HDAC4-201ENST00000345617 PGPA6NDG6 321 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 FAM181BA6NEQ2 426 aa16.65■□□□□ 0.26
HDAC4-201ENST00000345617 FAM159AQ6UWV7 190 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms