RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NEUROG1Q92886 237 aa15.37■□□□□ 0.05
SMC4-201ENST00000344722 LHFPL1Q86WI0 220 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 R4GN57 208 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 PLXNB2O15031 1838 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 SFTPCP11686 197 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 MC5RP33032 325 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 PTGDSP41222 190 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 PCSK4Q6UW60 755 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 C1QTNF9BB2RNN3 333 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 OR5P3Q8WZ94 311 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 AKIRIN1Q9H9L7 192 aaPredicted RBP15.36■□□□□ 0.05
SMC4-201ENST00000344722 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 LRRC37A2A6NM11 1700 aa15.36■□□□□ 0.05
SMC4-201ENST00000344722 hCG_38984A0A1B0GV85 526 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 IGHV2-70P01814 119 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 LYL1P12980 280 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 DGAT2L7PQ6IED9 249 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 VCX2Q9H322 139 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 C17orf51A8MQB3 221 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 H3BUT2 72 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 APELAP0DMC3 54 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 PNKDQ8N490 385 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 OR5A1Q8NGJ0 315 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 REG1BP48304 166 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 SUPT4H1P63272 117 aaKnown RBP15.35■□□□□ 0.05
SMC4-201ENST00000344722 ZNF664Q8N3J9 261 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 CTSBP07858 339 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 ACTL10Q5JWF8 245 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 TTC9CQ8N5M4 171 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 CALYQ9NYX4 217 aa15.35■□□□□ 0.05
SMC4-201ENST00000344722 A0A1B0GWB2 263 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 APOHP02749 345 aaPredicted RBP15.34■□□□□ 0.05
SMC4-201ENST00000344722 CCL1P22362 96 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 A0A0A6YYD4 124 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 C2orf83Q53S99 150 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 SLC25A10Q9UBX3 287 aaPredicted RBP15.34■□□□□ 0.05
SMC4-201ENST00000344722 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 LDLRAD4O15165 306 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 HIST1H1AQ02539 215 aaPredicted RBP15.34■□□□□ 0.05
SMC4-201ENST00000344722 ACSF3Q4G176 576 aaPredicted RBP15.34■□□□□ 0.05
SMC4-201ENST00000344722 SNAI2O43623 268 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 FOXL2P58012 376 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 FAM131CQ96AQ9 280 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 KNL1Q8NG31 2342 aa15.34■□□□□ 0.05
SMC4-201ENST00000344722 ATXN7O15265 892 aaPredicted RBP15.33■□□□□ 0.05
SMC4-201ENST00000344722 TDGF1P3P51864 188 aa15.33■□□□□ 0.05
SMC4-201ENST00000344722 FOXL1Q12952 345 aa15.33■□□□□ 0.05
SMC4-201ENST00000344722 OSTCQ9NRP0 149 aa15.33■□□□□ 0.05
SMC4-201ENST00000344722 TMEM74BQ9NUR3 256 aa15.33■□□□□ 0.05
SMC4-201ENST00000344722 ASCC3Q8N3C0 2202 aaKnown RBP15.33■□□□□ 0.05
SMC4-201ENST00000344722 IGHV1-45A0A0A0MS14 117 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 PSG9Q00887 426 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 DCAF10Q5QP82 559 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 TMEM208Q9BTX3 173 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 A0A1B0GW15 77 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 FAM157AC9JC47 383 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 MKRN2OSH3BPM6 223 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 PEX7O00628 323 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 MS4A5Q9H3V2 200 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 SYNGR3O43761 229 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 ZNF826PQ6ZT77 177 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 NUDT11Q96G61 164 aa15.33■□□□□ 0.04
SMC4-201ENST00000344722 RPP21Q9H633 154 aaKnown RBP15.33■□□□□ 0.04
SMC4-201ENST00000344722 TRIP12Q14669 1992 aaPredicted RBP15.32■□□□□ 0.04
SMC4-201ENST00000344722 H7C2G1 150 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 CA1P00915 261 aaPredicted RBP15.32■□□□□ 0.04
SMC4-201ENST00000344722 Q5PR19 223 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 C5orf67F2Z3F1 127 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 ZIC3O60481 467 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 MRPL13Q9BYD1 178 aaKnown RBP15.32■□□□□ 0.04
SMC4-201ENST00000344722 IDI2-AS1Q9NZ38 188 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 C1RLQ9NZP8 487 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 PARP14Q460N5 1801 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 GZMBP10144 247 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 RBPMS2Q6ZRY4 209 aaKnown RBP15.32■□□□□ 0.04
SMC4-201ENST00000344722 VKORC1L1Q8N0U8 176 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 SGK494Q96LW2 274 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 SRXN1Q9BYN0 137 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 TTTY12Q9BZ98 90 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 MEGF9Q9H1U4 602 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 CLEC1BQ9P126 229 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 RALGAPA2Q2PPJ7 1873 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 A8MWP6 167 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 OR4X2Q8NGF9 303 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 SIGMAR1Q99720 223 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 ST20Q9HBF5 79 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 WNT16Q9UBV4 365 aa15.32■□□□□ 0.04
SMC4-201ENST00000344722 ZNF638Q14966 1978 aaKnown RBP15.32■□□□□ 0.04
SMC4-201ENST00000344722 TMEM30BQ3MIR4 351 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 UBALD2Q8IYN6 164 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 EAF1Q96JC9 268 aaPredicted RBP15.31■□□□□ 0.04
SMC4-201ENST00000344722 OR11H12B2RN74 326 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 RBFOX2O43251 390 aaKnown RBP eCLIP15.31■□□□□ 0.043e-8■■■■■ 54.1
SMC4-201ENST00000344722 TSPAN7P41732 249 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 GPR6P46095 362 aaPredicted RBP15.31■□□□□ 0.04
SMC4-201ENST00000344722 NUDT10Q8NFP7 164 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 OR11H1Q8NG94 326 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms