RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NXPH3O95157 252 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 UBE2KP61086 200 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 POLR2GP62487 172 aaKnown RBP eCLIP13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 OR4A16Q8NH70 328 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 MAGT1Q9H0U3 335 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
CEACAM1-202ENST00000344391 UPK2O00526 184 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 IGKV1D-33P01593 117 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 IGKV1-33P01594 117 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 QTRT1Q9BXR0 403 aaKnown RBP13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 ITGB1BP2Q9UKP3 347 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
CEACAM1-202ENST00000344391 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 ARPC5O15511 151 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 RBMXL2O75526 392 aaKnown RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 SNAPC5O75971 98 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 MOSP00540 346 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 SNRNP70P08621 437 aaKnown RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 CD24P25063 80 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 OR2B8PP59922 312 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TNFRSF9Q07011 255 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 EBI3Q14213 229 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 VMA21Q3ZAQ7 101 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 LGALSLQ3ZCW2 172 aaPredicted RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 ZNF429Q86V71 674 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TSNAXQ99598 290 aaKnown RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TLN2Q9Y4G6 2542 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 A0A0U1RQK1 487 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 E5RGE8 158 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 SYNGR2O43760 224 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 SLC25A17O43808 307 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 CHST1O43916 411 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 KBTBD11O94819 623 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 CRYGBP07316 175 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 CXCL2P19875 107 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 CNTFRP26992 372 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 BRS3P32247 399 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 PSG5Q15238 335 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TEX45Q8NA69 505 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 OR52E5Q8NH55 327 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 TMEM14BQ9NUH8 114 aa13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 FOXA2Q9Y261 457 aaPredicted RBP13.1□□□□□ -0.31
CEACAM1-202ENST00000344391 WRBO00258 174 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 SSSCA1O60232 199 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 FSHBP01225 129 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 BPIFB3P59826 476 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 THNSL2Q86YJ6 484 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 Q8N6K4 173 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 RBKSQ9H477 322 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 ACANP16112 2415 aa13.09□□□□□ -0.31
CEACAM1-202ENST00000344391 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 KCNAB3O43448 404 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 MED6O75586 246 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 SPDEFO95238 335 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 TMEM50AO95807 157 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 PVALBP20472 110 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 PAX9P55771 341 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 HES1Q14469 280 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 HNF4GQ14541 408 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 PDLIM3Q53GG5 364 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 FAM120AOSQ5T036 256 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 ACOT7LQ6ZUV0 252 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 HSPB11Q9Y547 144 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 BAHCC1Q9P281 2608 aa13.08□□□□□ -0.32
CEACAM1-202ENST00000344391 P2RY1P47900 373 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 DYNLT3P51808 116 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 F2RL1P55085 397 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 SPCS3P61009 180 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 HSPE1P61604 102 aaKnown RBP13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 MRGPRG-AS1Q2M3A8 158 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 NPBQ8NG41 125 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 FKBP11Q9NYL4 201 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 OR51B2Q9Y5P1 312 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 PLXNB1O43157 2135 aa13.07□□□□□ -0.32
CEACAM1-202ENST00000344391 OTOGQ6ZRI0 2925 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms