RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 PLSCR4Q9NRQ2 329 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 DKK4Q9UBT3 224 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 PXMP4Q9Y6I8 212 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 CADP27708 2225 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 A0A1B0GUS0 222 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 FOXH1O75593 365 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 THBS3P49746 956 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 GNG10P50151 68 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 NUBP1P53384 320 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 MBNL2Q5VZF2 373 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 SPATA31B1PQ5VZV4 182 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 TMEM170AQ8WVE7 144 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 PYGO2Q9BRQ0 406 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 ZNRD1Q9P1U0 126 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
UBE2D3-203ENST00000343106 CNOT1A5YKK6 2376 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 DMXL2Q8TDJ6 3036 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 TRAV17A0A0B4J275 112 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ZNF891A8MT65 544 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 SRRM5B3KS81 715 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 MGST3O14880 152 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 GFRA3O60609 400 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ACTL6BO94805 426 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 IGLV1-44P01699 117 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 LOXL3P58215 753 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 RELBQ01201 579 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ITLN1Q8WWA0 313 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 CALYQ9NYX4 217 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.11e-7■□□□□ 10
UBE2D3-203ENST00000343106 PDE6DO43924 150 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 GZMBP10144 247 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 VDAC2P45880 294 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 RPP30P78346 268 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 SEM1Q6ZVN7 128 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 TCF23Q7RTU1 214 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 FAM90A1Q86YD7 464 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 LYG1Q8N1E2 194 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 TCF19Q9Y242 345 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 SLC25A15Q9Y619 301 aa8.17□□□□□ -1.1
UBE2D3-203ENST00000343106 A0A087X0M5 115 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 A0A1B0GX30 115 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 YPEL1O60688 119 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 IL3RAP26951 378 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 CT45A1Q5HYN5 189 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 TGIF2LYQ8IUE0 185 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 C1orf162Q8NEQ5 155 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 CT45A3Q8NHU0 189 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 SGMS2Q8NHU3 365 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 SNRNP40Q96DI7 357 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 YPEL2Q96QA6 119 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 GGTLC1Q9BX51 225 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 JPT1Q9UK76 154 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 CACNA1GO43497 2377 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 CEP250Q9BV73 2442 aa8.16□□□□□ -1.1
UBE2D3-203ENST00000343106 TRBV20OR9-2A0A075B6H5 130 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 SAA2-SAA4A0A096LPE2 208 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 GATCO43716 136 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 CGAP01215 116 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 FTH1P19P0C7X4 201 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 SAA2P0DJI9 122 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 DDTP30046 118 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 ARSJQ5FYB0 599 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 MOB3BQ86TA1 216 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 PPP1R35Q8TAP8 253 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 YTHDF2Q9Y5A9 579 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 KALRNO60229 2985 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 F6UZH7 168 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 GGCTO75223 188 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 VENTXO95231 258 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 CA2P00918 260 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 IL6RP08887 468 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 SRP14P37108 136 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 OPRK1P41145 380 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 KLF3P57682 345 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 PKIAP61925 76 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 MZT1Q08AG7 82 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 OR4A47Q6IF82 309 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 SFRP2Q96HF1 295 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 CCL13Q99616 98 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
UBE2D3-203ENST00000343106 SLC17A3O00476 420 aa8.14□□□□□ -1.11
UBE2D3-203ENST00000343106 MMP23AO75900 390 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms