RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CACNG7P62955 275 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 HBBP68871 147 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 EBLN2Q6P2I7 272 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF385DQ9H6B1 395 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 GEMIN7Q9H840 131 aaKnown RBP2.84□□□□□ -1.96
CSMD3-202ENST00000339701 FGF22Q9HCT0 170 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 CLCF1Q9UBD9 225 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 OR51B2Q9Y5P1 312 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 IGLV3-25P01717 112 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SMIM13P0DJ93 91 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 PSG2P11465 335 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 FAM106AQ4KMX7 169 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SLC25A48Q6ZT89 311 aaKnown RBP2.84□□□□□ -1.96
CSMD3-202ENST00000339701 DDB2Q92466 427 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM186Q96B77 213 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 MMP28Q9H239 520 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM56-RWDD3S4R434 201 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PP11 408 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 C22orf46C9J442 243 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 CRPP02741 224 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 LHX2P50458 406 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 PLAC9Q5JTB6 97 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 FAM57BQ71RH2 274 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 ANKRD37Q7Z713 158 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 OR8B12Q8NGG6 310 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 OR9G1Q8NH87 305 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 METTL26Q96S19 204 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 INSM2Q96T92 566 aaPredicted RBP2.84□□□□□ -1.96
CSMD3-202ENST00000339701 SYNPO2LQ9H987 977 aa2.84□□□□□ -1.96
CSMD3-202ENST00000339701 A0A0B4J2E0 115 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1B0GW64 132 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1B0GX12 115 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 CXorf49A8MYA2 514 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-202ENST00000339701 SSSCA1O60232 199 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 B3GALT4O96024 378 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ADRA2AP08913 450 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 SRIP30626 198 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF117Q03924 483 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 C12orf73Q69YU5 71 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF788Q6ZQV5 615 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 WDR89Q96FK6 387 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MIXL1Q9H2W2 232 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 FBXL15Q9H469 300 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
CSMD3-202ENST00000339701 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF462Q96JM2 2506 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MTORP42345 2549 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM189A5PLL7 270 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MLNRO43193 412 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 FCGR3AP08637 254 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MALP21145 153 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 Q56UQ5 140 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 DRAM1Q8N682 238 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 LRRC75AQ8NAA5 344 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 SLC16A11Q8NCK7 471 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR4D5Q8NGN0 318 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 FMC1Q96HJ9 113 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 CCDC140Q96MF4 163 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MSL2Q9HCI7 577 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 NRN1Q9NPD7 142 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM160Q9NX00 188 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ATG2AQ2TAZ0 1938 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 LOC105371242A0A075B767 164 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 C7orf72A4D263 438 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 J3QT63 122 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MGST3O14880 152 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 MPZP25189 248 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 FUT5Q11128 374 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 KISS1Q15726 138 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR10AC1Q8NH08 325 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 KLHDC2Q9Y2U9 406 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 C3orf85A0A1B0GTC6 90 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 GASTP01350 101 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ZP4Q12836 540 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ACKR1Q16570 336 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 PRICKLE4Q2TBC4 344 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 RNASE12Q5GAN4 147 aaKnown RBP2.83□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM144Q7Z5S9 345 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR51G1Q8NGK1 321 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 ZNF721Q8TF20 911 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 GNB1LQ9BYB4 327 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 SLC6A13Q9NSD5 602 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 DIRC3C9JPN6 131 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 UBE2L6O14933 153 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 RND3P61587 244 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 TGIF1Q15583 401 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR10J3Q5JRS4 329 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR4D11Q8NGI4 311 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 OR52M1Q8NGK5 317 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 IGHV3-20A0A0C4DH32 117 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 A0A1W2PPE3 182 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 PTP4A3O75365 173 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 CTAG2O75638 210 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 IGLV3-19P01714 112 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 IRF3Q14653 427 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 TMEM177Q53S58 311 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 FAM27BQ5VT28 67 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 GBGT1Q8N5D6 347 aa2.83□□□□□ -1.96
CSMD3-202ENST00000339701 RNF133Q8WVZ7 376 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms