RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 OR4F5Q8NH21 305 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 FAM210BQ96KR6 192 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 YPEL2Q96QA6 119 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 OR4F4Q96R69 305 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 IFI27L2Q9H2X8 130 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 CALYQ9NYX4 217 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 DOK5Q9P104 306 aa13.46□□□□□ -0.25
LITAF-201ENST00000339430 TANC2Q9HCD6 1990 aa13.46□□□□□ -0.26
LITAF-201ENST00000339430 MBP02144 154 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 MDKP21741 143 aaPredicted RBP13.45□□□□□ -0.26
LITAF-201ENST00000339430 VWC2Q2TAL6 325 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HEYLQ9NQ87 328 aaPredicted RBP13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BKO60814 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BJP06899 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BOP23527 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BBP33778 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BDP58876 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BCP62807 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 NKX6-1P78426 367 aaPredicted RBP13.45□□□□□ -0.26
LITAF-201ENST00000339430 ADORA2A-AS1P86434 159 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST2H2BEQ16778 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.45□□□□□ -0.26
LITAF-201ENST00000339430 C1orf87Q8N0U7 546 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BHQ93079 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 S1PR3Q99500 378 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BNQ99877 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 HIST1H2BMQ99879 126 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 ZFYVE26Q68DK2 2539 aa13.45□□□□□ -0.26
LITAF-201ENST00000339430 TRAV38-1A0A0B4J264 116 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 RRHO14718 337 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 PAGE4O60829 102 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 CD1BP29016 333 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 CHRNB4P30926 498 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 C4orf17Q53FE4 359 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 NECAP1Q8NC96 275 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 NAT8Q9UHE5 227 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 C17orf112F2Z3M2 114 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 F2RL2O00254 374 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 LHBP01229 141 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 CFHR2P36980 270 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 ERVK-16P61578 105 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 TMEM241Q24JQ0 296 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 ABHD12Q8N2K0 398 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 Q8N7P7 452 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 TCEAL7Q9BRU2 100 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 PARLQ9H300 379 aa13.44□□□□□ -0.26
LITAF-201ENST00000339430 ADGRG4Q8IZF6 3080 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 HOXA5P20719 270 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 CDC34P49427 236 aaPredicted RBP13.43□□□□□ -0.26
LITAF-201ENST00000339430 RND2P52198 227 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 C17orf58Q2M2W7 97 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 CR1LQ2VPA4 569 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 TMEM140Q9NV12 185 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 IFITM10A6NMD0 228 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 KBTBD11O94819 623 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 UQCRFS1P47985 274 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 SPCS3P61009 180 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 WFDC8Q8IUA0 241 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 ZNF251Q9BRH9 671 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 GCM1Q9NP62 436 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 TMEM242Q9NWH2 141 aa13.43□□□□□ -0.26
LITAF-201ENST00000339430 RPL23P62829 140 aaKnown RBP13.42□□□□□ -0.26
LITAF-201ENST00000339430 RELBQ01201 579 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 CDSNQ15517 529 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
LITAF-201ENST00000339430 CT45A1Q5HYN5 189 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 CYP2G1PQ6ZSU1 146 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 CT45A3Q8NHU0 189 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 FRZBQ92765 325 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
LITAF-201ENST00000339430 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 DYSFO75923 2080 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 IGLV3-9A0A075B6K5 115 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 SAA2-SAA4A0A096LPE2 208 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 FABP1P07148 127 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 THBDP07204 575 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 SAA2P0DJI9 122 aaPredicted RBP13.42□□□□□ -0.26
LITAF-201ENST00000339430 GNG10P50151 68 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 UBE2G2P60604 165 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 TNFAIP6P98066 277 aaPredicted RBP13.42□□□□□ -0.26
LITAF-201ENST00000339430 CLEC12BQ2HXU8 276 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 GFI1BQ5VTD9 330 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
LITAF-201ENST00000339430 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 GNLYP22749 145 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 S100A12P80511 92 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 BSXQ3C1V8 233 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 C3orf36Q3SXR2 165 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 OR5T1Q8NG75 326 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 SDSLQ96GA7 329 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 WFIKKN1Q96NZ8 548 aa13.41□□□□□ -0.26
LITAF-201ENST00000339430 CCL13Q99616 98 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms