RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 TRIM16LQ309B1 348 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 SP6Q3SY56 376 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 Q8N6K4 173 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 OSR1Q8TAX0 266 aaPredicted RBP9.15□□□□□ -0.94
TREM2-201ENST00000338469 GALNT14Q96FL9 552 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 HARBI1Q96MB7 349 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.94
TREM2-201ENST00000338469 RNF5Q99942 180 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 SLC25A33Q9BSK2 321 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 TMEM222Q9H0R3 208 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 AURKAIP1Q9NWT8 199 aaPredicted RBP9.15□□□□□ -0.94
TREM2-201ENST00000338469 COMMD9Q9P000 198 aa9.15□□□□□ -0.94
TREM2-201ENST00000338469 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 S1PR2O95136 353 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 DHFRP00374 187 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 HRASP01112 189 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 RPA2P15927 270 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 NQO2P16083 231 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 UCP1P25874 307 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 LGALS7P47929 136 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 TMEM187Q14656 261 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 MMDQ15546 238 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 ZNF585BQ52M93 769 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 LYG2Q86SG7 212 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 CASTOR1Q8WTX7 329 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 RITA1Q96K30 269 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
TREM2-201ENST00000338469 AIFM2Q9BRQ8 373 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 PLEKHA2Q9HB19 425 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 KIAA1456Q9P272 454 aa9.14□□□□□ -0.95
TREM2-201ENST00000338469 LINC01548A6NM66 108 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 NCBP2LA6PVI3 153 aaKnown RBP9.13□□□□□ -0.95
TREM2-201ENST00000338469 NBR2O15453 112 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 PRAF2O60831 178 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 ATG12O94817 140 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 OR2F2O95006 317 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 IL5P05113 134 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 CNTFRP26992 372 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 KRTAP10-11P60412 298 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 SRPXP78539 464 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 DHRS2Q13268 280 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 OXA1LQ15070 435 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 VMA21Q3ZAQ7 101 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 ZNF695Q8IW36 515 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 NPBQ8NG41 125 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 OR8H1Q8NGG4 311 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 OR52B4Q8NGK2 314 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 GLYATL2Q8WU03 294 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 CHPT1Q8WUD6 406 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 SEC22CQ9BRL7 303 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 GPN1Q9HCN4 374 aaPredicted RBP9.13□□□□□ -0.95
TREM2-201ENST00000338469 PRR13Q9NZ81 148 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 MOB4Q9Y3A3 225 aa9.13□□□□□ -0.95
TREM2-201ENST00000338469 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
TREM2-201ENST00000338469 COL7A1Q02388 2944 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 RRHO14718 337 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 SLC25A17O43808 307 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 NDUFA3O95167 84 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 SPDEFO95238 335 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 DUS4LO95620 317 aaKnown RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 CDS2O95674 445 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 KRASP01116 189 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 IGKV1-39P01597 117 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 IGLV2-23P01705 113 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 IGKV1D-39P04432 117 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 SAA1P0DJI8 122 aaPredicted RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 F2RL1P55085 397 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 ERVK-16P61578 105 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 PLGLAQ15195 96 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 PSG5Q15238 335 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 TMEM268Q5VZI3 342 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 CENPVQ7Z7K6 275 aaPredicted RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 SELENOHQ8IZQ5 122 aaKnown RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 LGI3Q8N145 548 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 DMBX1Q8NFW5 382 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 OR4F17Q8NGA8 305 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 COQ8AQ8NI60 647 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 RNASE11Q8TAA1 199 aaKnown RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 LHFPL5Q8TAF8 219 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 ZNF431Q8TF32 576 aaPredicted RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 RBPMSQ93062 196 aaKnown RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 RHOVQ96L33 236 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 TMEM56Q96MV1 263 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 NOL4LQ96MY1 436 aaPredicted RBP9.12□□□□□ -0.95
TREM2-201ENST00000338469 OR4F4Q96R69 305 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 LINC00527Q9UJ94 153 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 TMEM56-RWDD3S4R434 201 aa9.12□□□□□ -0.95
TREM2-201ENST00000338469 TCRBV4S1A1TA0A5B7 111 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms